Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
MC JC | NC_002947 | 1,842,640 | Δ36 bp | 100% | coding (2119‑2154/2754 nt) | gacS ← | sensor protein GacS |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_002947 | 1842640 | 1842675 | 36 | 76 [0] | [0] 75 | gacS | sensor protein GacS |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1842639 | 0 (0.000) | 61 (1.230) | 54/254 | NT | 100% | coding (2155/2754 nt) | gacS | sensor protein GacS |
? | NC_002947 | 1842676 = | 0 (0.000) | coding (2118/2754 nt) | gacS | sensor protein GacS |
TCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACATCCATCAGCACCAGGTCGAACAATTCTTCCTGCACGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGT > NC_002947/1842491‑1842784 | tcCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCAC > 6:154737‑M1/1‑149 (MQ=255) cATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACg < 7:225237‑M1/148‑2 (MQ=255) cATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGACATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACgg > 4:110427‑M1/1‑147 (MQ=255) gCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcct > 6:138620‑M1/1‑144 (MQ=255) ccGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctg < 3:266607‑M1/149‑7 (MQ=255) ccGCTGGGCAACAACGCGCGTTTTTCGTTGGCCATGGCATTGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcct < 4:249770‑M1/148‑6 (MQ=255) cTGTGCAACAACGCGCGTTTTTCGTTTGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtac < 2:77084‑M1/149‑10 (MQ=255) gcgcgTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataac > 5:259761‑M1/1‑128 (MQ=255) cgcgTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataacca < 7:50526‑M1/149‑23 (MQ=255) gcgTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccat < 2:68157‑M1/149‑24 (MQ=255) gTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattg > 3:227067‑M1/1‑124 (MQ=255) ttttCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgtt > 7:277195‑M1/1‑122 (MQ=255) gTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGTTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacg < 3:190931‑M1/148‑32 (MQ=255) ttGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcttacccattgtggacggc > 4:186489‑M1/1‑116 (MQ=255) gCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggcca < 4:227067‑M1/148‑36 (MQ=255) catggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcg < 5:154737‑M1/149‑44 (MQ=255) ggCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggca < 2:217249‑M1/148‑47 (MQ=255) cAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacc > 5:325658‑M1/1‑100 (MQ=255) cAGTGAGGGCGACGATCGGCAGCGGGTTGACGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCTCggcctgtaccgccgcataaccattgttgacggccagtacctcggcaccc < 2:228529‑M1/149‑50 (MQ=255) gAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGTCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggt > 1:163641‑M1/1‑96 (MQ=255) gacgaTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcga < 6:221515‑M1/149‑60 (MQ=255) acgaTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGTCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgag < 2:163641‑M1/149‑61 (MQ=255) gaTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGGACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgag > 1:85206‑M1/1‑87 (MQ=255) aTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcag < 3:110427‑M1/149‑64 (MQ=255) tCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagg > 5:321920‑M1/1‑85 (MQ=255) tCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagg > 4:271799‑M1/1‑85 (MQ=255) tCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagg < 2:85206‑M1/149‑65 (MQ=255) ggCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggt < 2:51654‑M1/149‑67 (MQ=255) gCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgggcagggtt > 7:224557‑M1/1‑82 (MQ=255) gagCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGTGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggttt < 6:145284‑M1/148‑69 (MQ=255) gCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggttttt < 4:147355‑M1/149‑71 (MQ=255) gTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtccctcggcacccaggtcttcgagcagggtttttac > 7:179599‑M1/1‑75 (MQ=255) ccGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcag > 4:86761‑M1/1‑71 (MQ=255) ccGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagca < 6:167489‑M1/148‑78 (MQ=255) tgtTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcg > 6:100609‑M1/1‑61 (MQ=255) ttCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcgg < 5:100609‑M1/148‑90 (MQ=255) tctcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggca > 7:282759‑M1/1‑58 (MQ=255) ctcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcat > 5:66391‑M1/1‑57 (MQ=255) ctcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcat > 8:78863‑M1/1‑57 (MQ=255) ctcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccatagttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcat > 5:15048‑M1/1‑57 (MQ=255) ccACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattg < 5:138620‑M1/148‑95 (MQ=255) ccACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccatt < 1:161497‑M1/78‑25 (MQ=255) ccACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccatt > 2:161497‑M1/1‑54 (MQ=255) acaGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcg > 6:264634‑M1/1‑52 (MQ=255) caGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgt < 6:321920‑M1/149‑99 (MQ=255) ttCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagccgcaggttggcggcattgtcgtcgacgcagagta > 7:117177‑M1/1‑39 (MQ=255) cGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttacca > 2:174731‑M1/1‑37 (MQ=255) cGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttacca < 1:174731‑M1/111‑75 (MQ=255) ggTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtggacgcagagtattt > 3:42492‑M1/1‑36 (MQ=255) tACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttc < 3:86761‑M1/149‑116 (MQ=255) tACAGGCGCGGCCGTCCATGCCGGGCATCTGCACggccagtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcgtcgagcagggtgtttagcagcagcagggtggcggcagtgtcgtcgacgcagagtattttc > 3:175047‑M1/1‑34 (MQ=255) cAGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcgg < 5:267802‑M1/149‑118 (MQ=255) aGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggt > 8:190327‑M1/1‑31 (MQ=255) aGGCGCGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggt > 8:195305‑M1/1‑31 (MQ=255) gcgcGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcg > 7:84547‑M1/1‑29 (MQ=255) gcgcGGCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcg > 4:163461‑M1/1‑29 (MQ=255) ggCCGTCCATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgc < 6:138145‑M1/149‑125 (MQ=255) cGTCCATGCCGGGCATCCGCACggcctgtaccgccgcataccccttgttgacggccagtacctcggcacccaggtcttcgagcaggggttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgcggg < 8:277195‑M1/149‑128 (MQ=255) ccATGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgcttgccg > 4:279916‑M1/1‑19 (MQ=255) aTGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcgg > 6:326898‑M1/1‑17 (MQ=255) aTGCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcgg < 5:326898‑M1/106‑90 (MQ=255) tGCCGGGCATCTGCACggcctgtagcgcctcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccaggagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttg < 3:283779‑M1/149‑134 (MQ=255) gCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctg > 7:131605‑M1/1‑15 (MQ=255) gCCGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctg < 8:131605‑M1/141‑127 (MQ=255) ccGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttgg < 3:186489‑M1/148‑135 (MQ=255) ccGGGCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttgg < 3:279916‑M1/148‑135 (MQ=255) ggCATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggtt > 6:145666‑M1/1‑11 (MQ=255) cATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggttgc < 7:190327‑M1/149‑141 (MQ=255) cATCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggttgc < 7:195305‑M1/149‑141 (MQ=255) aTCTGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggttgc > 2:303252‑M1/1‑8 (MQ=255) tGCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggttgctccc > 7:66333‑M1/1‑5 (MQ=255) gCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggttgctcccc > 2:24597‑M1/1‑4 (MQ=255) gCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggttgctcccc > 4:237397‑M1/1‑4 (MQ=255) gCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttc < 6:81792‑M1/119‑116 (MQ=255) gCACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttc > 5:81792‑M1/1‑4 (MQ=255) cACggcctgtaccgccgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggttgctc < 5:264634‑M1/145‑143 (MQ=255) | TCCATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACATCCATCAGCACCAGGTCGAACAATTCTTCCTGCACGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGT > NC_002947/1842491‑1842784 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |