Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NC_002947	1,842,640	Δ36 bp	100%	coding (2119‑2154/2754 nt)	gacS ←	sensor protein GacS

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	1842640	1842675	36	76 [0]	[0] 75	gacS	sensor protein GacS

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1842639	0 (0.000)	61 (1.230)	54/254	NT	100%	coding (2155/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	1842676 =	0 (0.000)					coding (2118/2754 nt)	gacS	sensor protein GacS

CATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACATCCATCAGCACCAGGTCGAACAATTCTTCCTGCACGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGCTCCCC  >  NC_002947/1842529‑1842820                                                                                                                                                    |                                                                                                                                                 catgccgctgtgcaacaacgcgcgtttttcgttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacg                                                                                                                                                  <  7:225237‑M2/1‑1 (MQ=255) catgccgctgtgcaacaacgcgcgtttttcgttggccatgacatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacgg                                                                                                                                                 >  4:110427‑M2/148‑149 (MQ=255)    gccgctgtgcaacaacgcgcgtttttcgttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCt                                                                                                                                              >  6:138620‑M2/145‑149 (MQ=255)     ccgctgtgcaacaacgcgcgtttttcgttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTg                                                                                                                                             <  3:266607‑M2/6‑1 (MQ=255)     ccgctgggcaacaacgcgcgtttttcgttggccatggcattggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCt                                                                                                                                              <  4:249770‑M2/5‑1 (MQ=255)        ctgtgcaacaacgcgcgtttttcgtttgccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTAc                                                                                                                                          <  2:77084‑M2/9‑1 (MQ=255)                    gcgcgtttttcgttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAAc                                                                                                                               >  5:259761‑M2/129‑148 (MQ=255)                     cgcgtttttcgttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCa                                                                                                                             <  7:50526‑M2/22‑1 (MQ=255)                      gcgtttttcgttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCAt                                                                                                                            <  2:68157‑M2/23‑1 (MQ=255)                        gtttttcgttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCAttg                                                                                                                          >  3:227067‑M2/125‑149 (MQ=255)                          ttttcgttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCAttgtt                                                                                                                        >  7:277195‑M2/123‑149 (MQ=255)                               gttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcgttacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACg                                                                                                                    <  3:190931‑M2/31‑1 (MQ=255)                                ttggccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCTTACCCATTGTGGACGGc                                                                                                                  >  4:186489‑M2/117‑149 (MQ=255)                                   gccatggcatgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCa                                                                                                                <  4:227067‑M2/35‑1 (MQ=255)                                          catgggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCg                                                                                                        <  5:154737‑M2/43‑1 (MQ=255)                                              ggcagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCa                                                                                                     <  2:217249‑M2/46‑1 (MQ=255)                                                cagtgagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCAcc                                                                                                   >  5:325658‑M2/101‑148 (MQ=255)                                                cagtgagggcgacgatcggcagcgggttgacgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgctcGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCAccc                                                                                                  <  2:228529‑M2/49‑1 (MQ=255)                                                    gagggcgacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggtcgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGt                                                                                              >  1:163641‑M2/97‑149 (MQ=255)                                                          gacgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGa                                                                                        <  6:221515‑M2/59‑1 (MQ=255)                                                           acgatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggtcgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAg                                                                                       <  2:163641‑M2/60‑1 (MQ=255)                                                             gatcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcgggacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAg                                                                                       >  1:85206‑M2/88‑147 (MQ=255)                                                              atcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAg                                                                                    <  3:110427‑M2/63‑1 (MQ=255)                                                               tcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAgg                                                                                   <  2:85206‑M2/64‑1 (MQ=255)                                                               tcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAgg                                                                                   >  5:321920‑M2/86‑149 (MQ=255)                                                               tcggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAgg                                                                                   >  4:271799‑M2/86‑149 (MQ=255)                                                                 ggcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGt                                                                                 <  2:51654‑M2/66‑1 (MQ=255)                                                                  gcagcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGGGCAGGGtt                                                                                >  7:224557‑M2/83‑149 (MQ=255)                                                                   gagcgggttgccgctctgggtgttctcccacaggtggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGttt                                                                               <  6:145284‑M2/68‑1 (MQ=255)                                                                     gcgggttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGttttt                                                                             <  4:147355‑M2/70‑1 (MQ=255)                                                                         gttgccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTCCCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTAc                                                                           >  7:179599‑M2/76‑147 (MQ=255)                                                                             ccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACcagcag                                                                     >  4:86761‑M2/72‑149 (MQ=255)                                                                             ccgctctgggtgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACcagca                                                                      <  6:167489‑M2/77‑1 (MQ=255)                                                                                       tgttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTggcg                                                           >  6:100609‑M2/62‑149 (MQ=255)                                                                                         ttctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTggcgg                                                          <  5:100609‑M2/89‑1 (MQ=255)                                                                                          tctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCa                                                        >  7:282759‑M2/59‑149 (MQ=255)                                                                                           ctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCAt                                                       >  5:66391‑M2/58‑149 (MQ=255)                                                                                           ctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCAt                                                       >  8:78863‑M2/58‑149 (MQ=255)                                                                                           ctcccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATAGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCAt                                                       >  5:15048‑M2/58‑149 (MQ=255)                                                                                              ccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCAtt                                                                                                                           <  1:161497‑M2/24‑1 (MQ=255)                                                                                              ccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCAtt                                                                                                                           >  2:161497‑M2/55‑78 (MQ=255)                                                                                              ccacaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTg                                                     <  5:138620‑M2/94‑1 (MQ=255)                                                                                                acaggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTgtcg                                                  >  6:264634‑M2/53‑149 (MQ=255)                                                                                                 caggcggatctgttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTgtcgt                                                 <  6:321920‑M2/98‑1 (MQ=255)                                                                                                             ttcggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCCGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTa                                     >  7:117177‑M2/40‑149 (MQ=255)                                                                                                               cggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACca                                                                         <  1:174731‑M2/74‑1 (MQ=255)                                                                                                               cggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACca                                                                         >  2:174731‑M2/38‑111 (MQ=255)                                                                                                                ggtacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTGGACGCAGAGTAttt                                  >  3:42492‑M2/37‑149 (MQ=255)                                                                                                                  tacaggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTc                                <  3:86761‑M2/115‑1 (MQ=255)                                                                                                                  tacaggcgcggccgtccatgccgggcatctgcacGGCCAGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCGTCGAGCAGGGTGTTTAGCAGCAGCAGGGTGGCGGCAGTGTCGTCGACGCAGAGTATTTTc                                >  3:175047‑M2/35‑149 (MQ=255)                                                                                                                    caggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCgg                              <  5:267802‑M2/117‑1 (MQ=255)                                                                                                                     aggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGgt                             >  8:195305‑M2/32‑149 (MQ=255)                                                                                                                     aggcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGgt                             >  8:190327‑M2/32‑149 (MQ=255)                                                                                                                       gcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGgtcg                           >  4:163461‑M2/30‑149 (MQ=255)                                                                                                                       gcgcggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGgtcg                           >  7:84547‑M2/30‑149 (MQ=255)                                                                                                                           ggccgtccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGc                       <  6:138145‑M2/124‑1 (MQ=255)                                                                                                                              cgtccatgccgggcatccgcacGGCCTGTACCGCCGCATACCCCTTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGGTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCggg                    <  8:277195‑M2/127‑1 (MQ=255)                                                                                                                                 ccatgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTTGCCg                 >  4:279916‑M2/20‑149 (MQ=255)                                                                                                                                   atgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTggcgg                                                          >  6:326898‑M2/18‑106 (MQ=255)                                                                                                                                   atgccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTggcgg                                                          <  5:326898‑M2/89‑1 (MQ=255)                                                                                                                                    tgccgggcatctgcacGGCCTGTAGCGCCTCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGGAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTg              <  3:283779‑M2/133‑1 (MQ=255)                                                                                                                                     gccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTg                     >  7:131605‑M2/16‑141 (MQ=255)                                                                                                                                     gccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTg                     <  8:131605‑M2/126‑1 (MQ=255)                                                                                                                                      ccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTgg             <  3:186489‑M2/134‑1 (MQ=255)                                                                                                                                      ccgggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTgg             <  3:279916‑M2/134‑1 (MQ=255)                                                                                                                                         ggcatctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGtt         >  6:145666‑M2/12‑149 (MQ=255)                                                                                                                                           catctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGc       <  7:190327‑M2/140‑1 (MQ=255)                                                                                                                                           catctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGc       <  7:195305‑M2/140‑1 (MQ=255)                                                                                                                                            atctgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGc       >  2:303252‑M2/9‑148 (MQ=255)                                                                                                                                               tgcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGCTccc   >  7:66333‑M2/6‑149 (MQ=255)                                                                                                                                                gcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTc                                <  6:81792‑M2/115‑1 (MQ=255)                                                                                                                                                gcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTc                                >  5:81792‑M2/5‑119 (MQ=255)                                                                                                                                                gcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGCTcccc  >  4:237397‑M2/5‑149 (MQ=255)                                                                                                                                                gcacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGCTcccc  >  2:24597‑M2/5‑149 (MQ=255)                                                                                                                                                 cacGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGCTc     <  5:264634‑M2/142‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                 CATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACATCCATCAGCACCAGGTCGAACAATTCTTCCTGCACGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAGAGTATTTTCGGTCGTCGCTGGCCGTTGGGGTTGCTCCCC  >  NC_002947/1842529‑1842820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑