| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_002947 | 3,788,572 | Δ23 bp | 100% | coding (41‑63/1392 nt) | PP_3350 ← | hypothetical protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 3788572 | 3788594 | 23 | 53 [0] | [0] 53 | PP_3350 | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3788571 | 0 (0.000) | 49 (0.950) | 40/264 | NT | 100% | coding (64/1392 nt) | PP_3350 | hypothetical protein |
| ? | NC_002947 | 3788595 = | 0 (0.000) | coding (40/1392 nt) | PP_3350 | hypothetical protein | |||||
CCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGC > NC_002947/3788425‑3788716 | ccAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAcc < 6:288008‑M1/149‑3 (MQ=255) aGGCCGACTCTGACAGCTGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccat < 4:99183‑M1/149‑5 (MQ=255) gCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatga < 3:35732‑M1/149‑7 (MQ=255) ccGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgag < 5:72149‑M1/149‑8 (MQ=255) tctGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgagggg > 7:199924‑M1/1‑137 (MQ=255) acatcagattgtaGCTCAGGCCATCGAAAGGGGCAGTGTCCTTGGCGGTGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGTGGCCCCTGGCCTCCCCGGCCTTCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcag < 1:205460‑M1/140‑14 (MQ=255) aCAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcag < 8:199924‑M1/146‑14 (MQ=255) cAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGACAACGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCACTACAAGCGGGCTGGCCGCGTAccatgaggggaaggca > 4:16977‑M1/1‑132 (MQ=255) ggCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggctt < 2:234213‑M1/149‑35 (MQ=255) cATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgat > 1:8307‑M1/1‑112 (MQ=255) gAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatc < 7:122034‑M1/149‑42 (MQ=255) ggggCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaa > 6:131668‑M1/1‑104 (MQ=255) ggggCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaa > 3:184777‑M1/1‑104 (MQ=255) aGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcc < 2:79637‑M1/149‑51 (MQ=255) ttGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcataagaatttcactacaat > 8:200591‑M1/1‑92 (MQ=255) ggCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttg > 3:119505‑M1/1‑90 (MQ=255) cGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGTCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtt < 4:77971‑M1/149‑62 (MQ=255) cGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtt < 4:184777‑M1/149‑62 (MQ=255) gtcgAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataa > 8:121932‑M1/1‑81 (MQ=255) tcgAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataat > 5:325013‑M1/1‑80 (MQ=255) aaGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttct < 7:121932‑M1/149‑76 (MQ=255) aGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttct > 4:226967‑M1/1‑73 (MQ=255) gTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaact < 3:309345‑M1/149‑84 (MQ=255) cTCGCTCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttat < 7:142880‑M1/129‑67 (MQ=255) cTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactgga > 1:162864‑M1/1‑63 (MQ=255) cTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactgg < 1:41841‑M1/148‑86 (MQ=255) cTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttat > 8:142880‑M1/1‑63 (MQ=255) gATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggat < 2:8307‑M1/147‑88 (MQ=255) gCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgt < 2:56039‑M1/149‑96 (MQ=255) gAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgtt < 3:16977‑M1/148‑97 (MQ=255) gCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgat > 5:171336‑M1/1‑47 (MQ=255) gCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttat > 8:207302‑M1/1‑47 (MQ=255) gCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattattttt < 5:131668‑M1/149‑110 (MQ=255) gCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattattttt < 4:57189‑M1/149‑110 (MQ=255) gCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaagcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattattttt < 3:164062‑M1/149‑110 (MQ=255) ccggccggCTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaac < 2:133533‑M1/149‑116 (MQ=255) cggccggcTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaacc < 6:325013‑M1/149‑117 (MQ=255) cggccggcTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttac > 3:209352‑M1/1‑33 (MQ=255) cggccggcTCTCTTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttac < 4:209352‑M1/111‑79 (MQ=255) tctctTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgc > 5:288688‑M1/1‑25 (MQ=255) tctctTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgc > 2:80272‑M1/1‑25 (MQ=255) tctTCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccg > 3:65122‑M1/1‑23 (MQ=255) ttCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgt > 6:4317‑M1/1‑21 (MQ=255) ttCAAGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgt > 7:45346‑M1/1‑21 (MQ=255) aGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaata < 5:4317‑M1/149‑133 (MQ=255) aGCGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaa > 5:100086‑M1/1‑17 (MQ=255) cGGGCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactagataactctgttaacgattatttttgttaaccatatgcgccgtcaatagc < 1:80272‑M1/149‑135 (MQ=255) gggCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatagcg < 7:200591‑M1/149‑136 (MQ=255) gggCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatagcg > 8:151294‑M1/1‑14 (MQ=255) gCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttc < 3:245123‑M1/66‑55 (MQ=255) gCTGGCCGCGTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttc > 4:245123‑M1/1‑12 (MQ=255) gTAccatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggataactctgttaacgattatttttgttaaccatatgcgccgtcaatagcgttttgccgtg > 8:278578‑M1/1‑3 (MQ=255) accatgaggggcaggcataccccgttcaacggcttgatcatcagaatttcccttcacttgtttttataattgttcttacaaactggat < 6:153176‑M1/88‑88 (MQ=255) | CCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGGGGCAGTGGCCTTGGCGGGGTCGTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGC > NC_002947/3788425‑3788716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |