New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5164208	76 (1.460)	4 (0.080)	4/258	NT	5.3%	coding (3672/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164246	69 (1.370)					coding (3634/3906 nt)	hrpA	ATP‑dependent helicase HrpA

GATATTCTTCCAGCCACCAGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTC  >  NC_002947/5164063‑5164354                                                                                                                                                  |                                                                                                                                                   gATATTCTTCCAGCCACCAGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGa                                                                                                                                                   <  5:18321/147‑1 (MQ=255) gATATTCTTCCAGCCACCAGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGa                                                                                                                                                   <  2:140189/147‑1 (MQ=255)        ttcCAGCCACCAGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTtctc                                                                                                                                            >  4:104684/1‑147 (MQ=255)           cAGCCACCAGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGgc                                                                                                                                       <  2:183524/149‑1 (MQ=255)                accaGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACTGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGa                                                                                                                                          <  5:14360/141‑1 (MQ=255)                accaGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACTGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGa                                                                                                                                          >  6:14360/1‑141 (MQ=255)                  caGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTc                                                                                                                                <  5:222001/149‑1 (MQ=255)                   aGCGGTAGACGGTCAGTTGCTCTTCGCGGTTGCCTTCCTGGGCATGCTTGTCGGCACGGGGCTTGTACTGCGCCCACAGGTTGGCCAATTCGCGGCTCCACAGCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCa                                                                                                                               <  2:310864/149‑1 (MQ=255)                    gCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCaa                                                                                                                              <  4:189200/149‑1 (MQ=255)                    gCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCaa                                                                                                                              >  4:313122/1‑149 (MQ=255)                         acccGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGcc                                                                                                                         >  2:148196/4‑149 (MQ=255)                          cacGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCt                                                                                                                        >  1:74495/1‑149 (MQ=255)                          cacGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCt                                                                                                                        >  7:131065/1‑149 (MQ=255)                           acGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCtt                                                                                                                       >  1:230483/1‑149 (MQ=255)                             ggTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCtt                                                                                                                       >  2:180283/1‑147 (MQ=255)                             ggTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGa                                                                                                                     <  4:296399/149‑1 (MQ=255)                              gTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAg                                                                                                                    <  8:131065/149‑1 (MQ=255)                               tCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAgg                                                                                                                   >  5:278319/1‑149 (MQ=255)                                 aGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGt                                                                                                                  >  6:127014/1‑148 (MQ=255)                                       tCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGcgg                                                                                                           <  4:258036‑M2/149‑4 (MQ=255)                                         aTCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCTCCCACAGGTTGGCCAATTCCCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGagtttctcaaggcggttgaattgcgcctcgagaaactcggc                                                                                                           <  1:104058‑M1/147‑42 (MQ=255)                                          tCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCaa                                                                                                        <  1:148196/149‑1 (MQ=255)                                              gcTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTcc                                                                                                    <  3:305170/149‑1 (MQ=255)                                               cTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGcgttacctcaaggcggttgaattgcgcctcgagaaactcggctcgcaag                                                                                                   <  5:131944‑M1/149‑50 (MQ=255)                                               cTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACAGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCt                                                                                                   <  7:57949/149‑1 (MQ=255)                                                    cTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGcgttacctcaaggcggttgaattgcgcctcgagaaactcggctcgcaa                                                                                                    <  4:41074‑M1/143‑49 (MQ=255)                                                    cTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGcgttacctcaaggcggttgaattgcgcctcgagaaactcggctcgcaa                                                                                                    >  3:41074‑M1/1‑95 (MQ=255)                                                    cTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                              <  2:230483/149‑1 (MQ=255)                                                    cTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                              <  3:163829/149‑1 (MQ=255)                                                    cTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                              <  3:267374/149‑1 (MQ=255)                                                     ttCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTGCTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                              >  5:26870/1‑148 (MQ=255)                                                     ttCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAcc                                                                                             >  3:10117/1‑149 (MQ=255)                                                        cTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACcaca                                                                                          <  4:10117/149‑1 (MQ=255)                                                         tGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCacac                                                                                         >  1:175712/1‑149 (MQ=255)                                                          gggCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACAcc                                                                                        >  3:174710/1‑149 (MQ=255)                                                                gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGaa                                                                                               >  2:273220/1‑136 (MQ=255)                                                                gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGaa                                                                                               <  1:273220/136‑1 (MQ=255)                                                                gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                              >  6:16319/1‑137 (MQ=255)                                                                gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                              <  5:16319/137‑1 (MQ=255)                                                                gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGc                                                                                  >  5:237761/1‑149 (MQ=255)                                                                    gTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGttt                                                                              >  1:58416/1‑149 (MQ=255)                                                                    gTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGttt                                                                              >  6:117696/1‑149 (MQ=255)                                                                    gTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGtt                                                                               <  3:139820/148‑1 (MQ=255)                                                                     tCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTc                                                                             <  6:278319/149‑1 (MQ=255)                                                                       ggCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCt                                                                                                   >  2:22244/1‑125 (MQ=255)                                                                       ggCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCt                                                                                                   <  1:22244/125‑1 (MQ=255)                                                                       ggCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTcgc                                                                           >  6:239505/1‑149 (MQ=255)                                                                       ggCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTcgc                                                                           <  1:180283/149‑1 (MQ=255)                                                                        gCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTg                                                                                                                      <  8:163201/105‑1 (MQ=255)                                                                        gCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTg                                                                                                                      >  7:163201/1‑105 (MQ=255)                                                                        gCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTcgcg                                                                          <  2:140934/149‑1 (MQ=255)                                                                           cGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTAc                                                                       <  2:175712/149‑1 (MQ=255)                                                                              gCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGaa                                                                    <  5:239505/149‑1 (MQ=255)                                                                                cTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGc                                                                  >  3:251646/1‑149 (MQ=255)                                                                                 ttGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGcc                                                                 >  8:136427/1‑149 (MQ=255)                                                                                   gTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCg                                                               >  7:255727/1‑149 (MQ=255)                                                                                      cTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCggg                                                             <  4:174710/148‑1 (MQ=255)                                                                                         cgcCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTaca                                                         >  1:258657/1‑149 (MQ=255)                                                                                          gcCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTacac                                                        <  6:237761/149‑1 (MQ=255)                                                                                          gcCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTacac                                                        <  8:255727/149‑1 (MQ=255)                                                                                            ccACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTacac                                                        >  3:181863/1‑147 (MQ=255)                                                                                             cacaGGTTGGCCAATTCGCCTCTCCACACCCGGTCCTTCTGTAATTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAg                                                     <  4:85703/149‑1 (MQ=255)                                                                                                   ttGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGcc                                               <  2:74495/149‑1 (MQ=255)                                                                                                   ttGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGcc                                               >  3:24190/1‑149 (MQ=255)                                                                                                      gCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAg                                            <  3:104684/149‑1 (MQ=255)                                                                                                       ccAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgc                                           <  7:136427/149‑1 (MQ=255)                                                                                                       ccAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgc                                           <  3:313122/149‑1 (MQ=255)                                                                                                          aTTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgctgc                                        <  2:258657/149‑1 (MQ=255)                                                                                                             cgccgcTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgctgctg                                      <  2:58416/148‑1 (MQ=255)                                                                                                              gccgcTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgctgctgct                                    >  3:156537/1‑149 (MQ=255)                                                                                                              gccgcTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCCGGTACACCAGGTTGCCTAgctgctgct                                    >  1:78164/1‑149 (MQ=255)                                                                                                                cgcTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTg                                  <  5:117696/149‑1 (MQ=255)                                                                                                                      acacCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCg                            >  3:128565/1‑149 (MQ=255)                                                                                                                        acCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGtt                          <  3:258036/149‑1 (MQ=255)                                                                                                                            ggTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGt                      <  4:24190/149‑1 (MQ=255)                                                                                                                             gTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGt                              >  7:218820/1‑140 (MQ=255)                                                                                                                             gTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGt                              <  8:218820/140‑1 (MQ=255)                                                                                                                                 ttCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGCAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCAc                 >  6:16096/1‑149 (MQ=255)                                                                                                                                 ttCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCAc                 >  7:99/1‑149 (MQ=255)                                                                                                                                        cTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGcggctcgcaagtacagaaggaccgggtgtggagcggcgaattggccaacctgtgggcgcagtacaaggcccgtgccgacaagcatgcccaggaaggcaag          <  5:131944‑M2/149‑101 (MQ=255)                                                                                                                                        cTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTgg          >  5:199401/1‑149 (MQ=255)                                                                                                                                         ttGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGcggctcgcaagtacagaaggaccgggtgtggagcggcgaattggccaacctgtgggcgcagtacaaggcccgtgccgacaagcatgcccaggaag               <  4:41074‑M2/143‑96 (MQ=255)                                                                                                                                         ttGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGcggctcgcaagtacagaaggaccgggtgtggagcggcgaattggccaacctgtgggcgcagtacaaggcccgtgccgacaagcatgcccaggaag               >  3:41074‑M2/1‑48 (MQ=255)                                                                                                                                           gCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTAGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGCGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCt        >  3:140805/1‑148 (MQ=255)                                                                                                                                            cGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCt        >  7:123407/1‑147 (MQ=255)                                                                                                                                             gAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTAAGGTAACACGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAg     >  3:135947/1‑149 (MQ=255)                                                                                                                                              aGCCGATTTTCTCGAGGAGCAATTCAACGGCCTTTAGGTAACGCTGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAgg    <  4:251646/149‑1 (MQ=255)                                                                                                                                               gCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGA‑AACTcggctcgcaagtacagaaggaccgggtgtggagcggggaattggccaacctgtgggagcagtacaaggcccgtgccgacaagcatgcccaggaaggcaagcgcgat    <  1:104058‑M2/147‑107 (MQ=255)                                                                                                                                                ccGcgttacctcaaggcggttgaattgcgcctcgagaaactcggctcgcaagtacagaaggaccgggtgtggagcggcgaattggccaacctgtgggcgcagtacaaggcccgtgccgacaagcatgcccaggaaggcaagcgcgatga  <  4:258036‑M1/149‑147 (MQ=255)                                                                                                                                                  |                                                                                                                                                   GATATTCTTCCAGCCACCAGCGGTACACGGTCAGTTGCTCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTC  >  NC_002947/5164063‑5164354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.