New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5164208	76 (1.460)	4 (0.080)	4/258	NT	5.3%	coding (3672/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164246	69 (1.370)					coding (3634/3906 nt)	hrpA	ATP‑dependent helicase HrpA

TCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCAT  >  NC_002947/5164101‑5164386                                                                                                                                                  |                                                                                                                                             tCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGcgg                                                                                                                                           <  4:258036‑M2/149‑4 (MQ=255)    tCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCaa                                                                                                                                        <  1:148196/149‑1 (MQ=255)        gcTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTcc                                                                                                                                    <  3:305170/149‑1 (MQ=255)         cTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACAGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCt                                                                                                                                   <  7:57949/149‑1 (MQ=255)              cTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                                                              <  3:267374/149‑1 (MQ=255)              cTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                                                              <  3:163829/149‑1 (MQ=255)              cTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                                                              <  2:230483/149‑1 (MQ=255)               ttCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTGCTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                                                              >  5:26870/1‑148 (MQ=255)               ttCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAcc                                                                                                                             >  3:10117/1‑149 (MQ=255)                  cTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACcaca                                                                                                                          <  4:10117/149‑1 (MQ=255)                   tGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCacac                                                                                                                         >  1:175712/1‑149 (MQ=255)                    gggCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACAcc                                                                                                                        >  3:174710/1‑149 (MQ=255)                          gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGaa                                                                                                                               >  2:273220/1‑136 (MQ=255)                          gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGaa                                                                                                                               <  1:273220/136‑1 (MQ=255)                          gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                                                              <  5:16319/137‑1 (MQ=255)                          gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAAc                                                                                                                              >  6:16319/1‑137 (MQ=255)                          gCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGc                                                                                                                  >  5:237761/1‑149 (MQ=255)                              gTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGttt                                                                                                              >  1:58416/1‑149 (MQ=255)                              gTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGttt                                                                                                              >  6:117696/1‑149 (MQ=255)                              gTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGtt                                                                                                               <  3:139820/148‑1 (MQ=255)                               tCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTc                                                                                                             <  6:278319/149‑1 (MQ=255)                                 ggCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCt                                                                                                                                   <  1:22244/125‑1 (MQ=255)                                 ggCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCt                                                                                                                                   >  2:22244/1‑125 (MQ=255)                                 ggCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTcgc                                                                                                           >  6:239505/1‑149 (MQ=255)                                 ggCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTcgc                                                                                                           <  1:180283/149‑1 (MQ=255)                                  gCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTcgcg                                                                                                          <  2:140934/149‑1 (MQ=255)                                     cGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTAc                                                                                                       <  2:175712/149‑1 (MQ=255)                                        gCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGaa                                                                                                    <  5:239505/149‑1 (MQ=255)                                          cTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGc                                                                                                  >  3:251646/1‑149 (MQ=255)                                           ttGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGcc                                                                                                 >  8:136427/1‑149 (MQ=255)                                             gTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCg                                                                                               >  7:255727/1‑149 (MQ=255)                                                cTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCggg                                                                                             <  4:174710/148‑1 (MQ=255)                                                   cgcCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTaca                                                                                         >  1:258657/1‑149 (MQ=255)                                                    gcCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTacac                                                                                        <  6:237761/149‑1 (MQ=255)                                                    gcCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTacac                                                                                        <  8:255727/149‑1 (MQ=255)                                                      ccACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTacac                                                                                        >  3:181863/1‑147 (MQ=255)                                                       cacaGGTTGGCCAATTCGCCTCTCCACACCCGGTCCTTCTGTAATTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAg                                                                                     <  4:85703/149‑1 (MQ=255)                                                             ttGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGcc                                                                               >  3:24190/1‑149 (MQ=255)                                                             ttGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGcc                                                                               <  2:74495/149‑1 (MQ=255)                                                                gCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAg                                                                            <  3:104684/149‑1 (MQ=255)                                                                 ccAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgc                                                                           <  3:313122/149‑1 (MQ=255)                                                                 ccAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgc                                                                           <  7:136427/149‑1 (MQ=255)                                                                    aTTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgctgc                                                                        <  2:258657/149‑1 (MQ=255)                                                                       cgccgcTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgctgctg                                                                      <  2:58416/148‑1 (MQ=255)                                                                        gccgcTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAgctgctgct                                                                    >  3:156537/1‑149 (MQ=255)                                                                        gccgcTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCCGGTACACCAGGTTGCCTAgctgctgct                                                                    >  1:78164/1‑149 (MQ=255)                                                                          cgcTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTg                                                                  <  5:117696/149‑1 (MQ=255)                                                                                acacCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCg                                                            >  3:128565/1‑149 (MQ=255)                                                                                  acCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGtt                                                          <  3:258036/149‑1 (MQ=255)                                                                                      ggTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGt                                                      <  4:24190/149‑1 (MQ=255)                                                                                       gTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGt                                                              <  8:218820/140‑1 (MQ=255)                                                                                       gTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGt                                                              >  7:218820/1‑140 (MQ=255)                                                                                           ttCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGCAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCAc                                                 >  6:16096/1‑149 (MQ=255)                                                                                           ttCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCAc                                                 >  7:99/1‑149 (MQ=255)                                                                                                  cTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGcggctcgcaagtacagaaggaccgggtgtggagcggcgaattggccaacctgtgggcgcagtacaaggcccgtgccgacaagcatgcccaggaaggcaag                                          <  5:131944‑M2/149‑101 (MQ=255)                                                                                                  cTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTgg                                          >  5:199401/1‑149 (MQ=255)                                                                                                   ttGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGcggctcgcaagtacagaaggaccgggtgtggagcggcgaattggccaacctgtgggcgcagtacaaggcccgtgccgacaagcatgcccaggaag                                               <  4:41074‑M2/143‑96 (MQ=255)                                                                                                   ttGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGcggctcgcaagtacagaaggaccgggtgtggagcggcgaattggccaacctgtgggcgcagtacaaggcccgtgccgacaagcatgcccaggaag                                               >  3:41074‑M2/1‑48 (MQ=255)                                                                                                     gCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTAGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGCGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCt                                        >  3:140805/1‑148 (MQ=255)                                                                                                      cGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCt                                        >  7:123407/1‑147 (MQ=255)                                                                                                       gAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTAAGGTAACACGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAg                                     >  3:135947/1‑149 (MQ=255)                                                                                                        aGCCGATTTTCTCGAGGAGCAATTCAACGGCCTTTAGGTAACGCTGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAgg                                    <  4:251646/149‑1 (MQ=255)                                                                                                         gCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGA‑AACTcggctcgcaagtacagaaggaccgggtgtggagcggggaattggccaacctgtgggagcagtacaaggcccgtgccgacaagcatgcccaggaaggcaagcgcgat                                    <  1:104058‑M2/147‑107 (MQ=255)                                                                                                              gTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATc                              <  6:26870/149‑1 (MQ=255)                                                                                                                 tctcGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCtt                            <  4:128565/148‑1 (MQ=255)                                                                                                                 tctcGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCtt                            <  6:199401/148‑1 (MQ=255)                                                                                                                  ctcGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTg                           <  4:181863/148‑1 (MQ=255)                                                                                                                   tcGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGcc                         >  4:277586/1‑149 (MQ=255)                                                                                                                        gcgcAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGa                    <  3:277586/149‑1 (MQ=255)                                                                                                                                cAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGttt             <  8:123407/148‑1 (MQ=255)                                                                                                                                cAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGttt             <  4:156537/148‑1 (MQ=255)                                                                                                                                  aCCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTg          <  5:127014/149‑1 (MQ=255)                                                                                                                                   ccGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTg          >  8:82344/1‑148 (MQ=255)                                                                                                                                    cGCCTTAAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTg          >  5:21952/1‑147 (MQ=255)                                                                                                                                           aGGTAACGCGGCAACTCCTTGAACCACACCCCACGCGTTTCGCGTCCGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCAt  <  2:293376/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                             TCATCGCGCTTGCCTTCCTGGGCATGCTTGTCGGCACGGGCCTTGTACTGCGCCCACAGGTTGGCCAATTCGCCGCTCCACACCCGGTCCTTCTGTACTTGCGAGCCGAGTTTCTCGAGGCGCAATTCAACCGCCTTGAGGTAACGCGGCAACTCCTTGAACCACACCCCAGGCGTTTCGCGTACGAAGCCCGGGTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCAT  >  NC_002947/5164101‑5164386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.