New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5291886	53 (1.020)	3 (0.060)	3/252	NT	6.2%	intergenic (+116/+76)	PP_4665/mmsB	hypothetical protein/3‑hydroxyisobutyrate dehydrogenase
	?	NC_002947	= 5291937	41 (0.830)					intergenic (+167/+25)	PP_4665/mmsB	hypothetical protein/3‑hydroxyisobutyrate dehydrogenase

CTGTACGTAAGTATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAGTCCTTGCCACCCTCGCCTCGCAGGCTCATGGCC  >  NC_002947/5291742‑5292034                                                                                                                                                 |                                                                                                                                                       cTGTACGTAAGTATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGc                                                                                                                                                     <  2:94241/148‑1 (MQ=255)  tGTACGTAAGTATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGATGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGat                                                                                                                                                      >  3:203202/1‑145 (MQ=255)        tAAGTATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGc‑cc                                                                                                                                           >  3:225992/1‑149 (MQ=255)        tAAGTATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGc‑cc                                                                                                                                           >  3:316800/1‑149 (MQ=255)            tATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTcc                                                                                                                                       <  3:131022/149‑1 (MQ=255)            tATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTcc                                                                                                                                       <  5:177180/149‑1 (MQ=255)            tATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTcc                                                                                                                                       <  5:200007/149‑1 (MQ=255)              tttCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGa                                                                                                                                                       <  2:184502/133‑1 (MQ=255)              tttCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGa                                                                                                                                                       >  1:184502/1‑133 (MQ=255)              tttCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTccc                                                                                                                                      >  6:168213/1‑148 (MQ=255)                     ttCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGa                                                                                                                                                       >  5:221556/1‑126 (MQ=255)                     ttCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGa                                                                                                                                                       <  6:221556/126‑1 (MQ=255)                     ttCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTgc                                                                                                                              >  6:210830/1‑149 (MQ=255)                        gCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTAGTGCGCa                                                                                                                           <  2:155234/149‑1 (MQ=255)                             aCTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGtt                                                                                                                        <  4:316800/147‑1 (MQ=255)                              cTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACa                                                                                                                     <  4:179829/149‑1 (MQ=255)                                  cAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGTAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACagag                                                                                                                  <  5:168213/148‑1 (MQ=255)                                  cAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAgg                                                                                                                 >  1:167527/1‑149 (MQ=255)                                     gcgcGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAggg                                                                                                                >  4:184645/1‑147 (MQ=255)                                      cgcgGGTTTATCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAg                                                                                                             <  6:228081/149‑1 (MQ=255)                                      cgcgGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAg                                                                                                             <  4:40760/149‑1 (MQ=255)                                           gTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCAc                                                                                                        >  2:272178/1‑149 (MQ=255)                                            tttACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCAcc                                                                                                       <  5:210830/149‑1 (MQ=255)                                                 cTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCTGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCc                                                                                                  <  8:222882‑M2/149‑2 (MQ=255)                                                 cTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGgccaggtggccttccctctgtaactgcgcaccagagggaagggcgtctgctc                                                                                                    >  1:145502‑M1/1‑97 (MQ=255)                                                 cTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCc                                                                                                  <  6:174928‑M2/149‑2 (MQ=255)                                                  tGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGc                                                                                                   <  6:10885/147‑1 (MQ=255)                                                  tGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGc                                                                                                   >  5:10885/1‑147 (MQ=255)                                                    cTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGgccaggtggccttccctctgtaactgcgcaccagagggaagggcgtctgctccgc                                                                                                 <  3:168632‑M1/149‑56 (MQ=255)                                                     tAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACag                                                                                                                    >  8:170324/1‑127 (MQ=255)                                                     tAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACag                                                                                                                    <  7:170324/127‑1 (MQ=255)                                                       aTGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGgccaggtggccttccctctgtaactgcgcaccagagggaagggcgtctgctccgcga                                                                                               <  2:145502‑M1/148‑58 (MQ=255)                                                          cggcggTGAGGCTTCTGTAGCATTCGCGTGTGAACCCGCTCCTACCACGGCCACGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGaa                                                                                         <  3:171861/149‑1 (MQ=255)                                                            gcggTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGt                                                                                       <  2:22674/149‑1 (MQ=255)                                                                     cTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCtt                                                                              <  5:258682/149‑1 (MQ=255)                                                                     cTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCtt                                                                              <  1:65390/149‑1 (MQ=255)                                                                      ttCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCtt                                                                              >  2:65390/1‑148 (MQ=255)                                                                           tAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCtt                                                                              <  6:97052/143‑1 (MQ=255)                                                                           tAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCtt                                                                              >  5:97052/1‑143 (MQ=255)                                                                              cATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTTGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAAt                                                                      <  4:225992/148‑1 (MQ=255)                                                                                ttCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCct                                                                   >  2:45499/1‑149 (MQ=255)                                                                                ttCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCct                                                                   >  7:78844/1‑149 (MQ=255)                                                                                   gcgGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCcttc                                                                 <  3:184645/148‑1 (MQ=255)                                                                                    cgGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTATTCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGTCCCGCGATGAAGTCCACCTCTTGCATCAATCcttctt                                                               <  7:115109/149‑1 (MQ=255)                                                                                    cgGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCcttctt                                                               <  2:167527/149‑1 (MQ=255)                                                                                       gTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGAATCAATCCTTCTTGc                                                             >  7:188489/1‑148 (MQ=255)                                                                                        tGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGa                                                           <  5:174928/149‑1 (MQ=255)                                                                                            cccGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGCAGTCCACCTCTTGCATCACTCCTTCTTGCGATAAc                                                       >  8:212224/1‑149 (MQ=255)                                                                                             ccGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAAcc                                                      >  5:235655/1‑149 (MQ=255)                                                                                             ccGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAAcc                                                      >  1:319704/1‑149 (MQ=255)                                                                                               gCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAggg                                                                                                                >  5:288170/1‑89 (MQ=255)                                                                                               gCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAggg                                                                                                                <  6:288170/89‑1 (MQ=255)                                                                                                            ccGCTCACTACCTGTAATCGTGGACAAAAAAATCGCGGAGCAGT‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGcc                                         <  4:203202/147‑1 (MQ=255)                                                                                                            ccGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGcc                                         >  2:258230/1‑147 (MQ=255)                                                                                                            ccGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCga                                       <  1:45499/149‑1 (MQ=255)                                                                                                                gcACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAg                                   >  5:231967/1‑149 (MQ=255)                                                                                                                  aCTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGACCTCTCCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAg                                   <  1:272178/149‑1 (MQ=255)                                                                                                                         gTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAGTCCTTGCCa                          >  3:38905/1‑149 (MQ=255)                                                                                                                            aGCTTGGACAATATATTCGCGTAGCAGA‑CGC‑CGTTCCCTCTGGTGCGCAGTTACAGATGGAAGGCGTCCTGGACCGCGATTAAGTCAACCTCTTGCATCAATCGTTCTTGCGATAACCCTGGTCGATGGCCGAGAAGTCCTTGCCAcc                        <  4:38905/148‑1 (MQ=255)                                                                                                                                 ggACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAGTCCTTGCCACcctcgcc                  >  3:295800/1‑149 (MQ=255)                                                                                                                                 ggACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAGTCCTTGCCACcctcgc                   >  3:282568/1‑148 (MQ=255)                                                                                                                                    cAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAGTCCTTGCCACcctcgcctcg               >  7:71274/1‑149 (MQ=255)                                                                                                                                     aaaaaaaTCGCGGAGCAGA‑CGC‑CCTTCCCACTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCATGCATCAATCCTTCTTGCGAAAACCCTCGACGATGGCCGAGAAGTCCTTGCCACcctcgcctcg               >  7:194233/1‑148 (MQ=255)                                                                                                                                      aaaaaaTCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAGTCCTTGCCACcctcgcctcg               >  8:217386/1‑147 (MQ=255)                                                                                                                                            tCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCccgcgatttttttgtccacgcttacaggtagtgcgcggccgtggtaggagcgggttcacccgcgaatgctacagaagcctcaccgccgcat        <  2:145502‑M2/148‑92 (MQ=255)                                                                                                                                              gcgGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCccgcgatttttttgtccacgcttacaggtagtgcgcggccgtggtaggagcgggttcacccgcgaatgctacagaagcctcaccgccgcattag     <  3:168632‑M2/149‑95 (MQ=255)                                                                                                                                                 ggccaggtggccttccctctgtaactgcgcaccagagggaagggcgtctgctccgcgatttttttgtccacgcttacaggtagtgcgcggccgtggtaggagcgggttcacccgcgaatgctacagaagcctcaccgccgcattagcag    <  6:174928‑M1/149‑149 (MQ=255)                                                                                                                                                 ggccaggtggccttccctctgtaactgcgcaccagagggaagggcgtctgctccgcgatttttttgtccacgcttacaggtagtgcgcagccgtggtaggagcgggttcacccgcgaatgctacagaagcctcaccgccgcattagcag    <  8:222882‑M1/149‑149 (MQ=255)                                                                                                                                                 gAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCccgcgatttttttgtccacgcttacaggtagtgcgcggccgtggtaggagcgggttcacccgcgaatgctacagaagcctcaccgccgcattagcag  >  1:145502‑M2/1‑52 (MQ=255)                                                                                                                                                 |                                                                                                                                                       CTGTACGTAAGTATTTCGTCTTCGCCTGACTTGCAGGCGCGGGTTTACCTGCTAATGCGGCGGTGAGGCTTCTGTAGCATTCGCGGGTGAACCCGCTCCTACCACGGCCGCGCACTACCTGTAAGCGTGGACAAAAAAATCGCGGAGCAGA‑CGC‑CCTTCCCTCTGGTGCGCAGTTACAGAGGGAAGGCCACCTGGCCCGCGATGAAGTCCACCTCTTGCATCAATCCTTCTTGCGATAACCCTCGACGATGGCCGAGAAGTCCTTGCCACCCTCGCCTCGCAGGCTCATGGCC  >  NC_002947/5291742‑5292034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.