New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5617548 =	65 (1.250)	4 (0.080)	4/254	NT	6.2%	coding (1104/1176 nt)	wzy	O‑antigen polymerase
	?	NC_002947	5617594 =	59 (1.190)					coding (1058/1176 nt)	wzy	O‑antigen polymerase

AGCCGGAAGTAGATCTTCAGGCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTCGCCCAGCG  >  NC_002947/5617402‑5617696                                                                                                                                                    |                                                                                                                                                     gggcttgcccggcatgttgctgtgggtaatggtgtggctgttcacgctgggcgaaatcgtgcgcgcccgcggcaccctgttcggcaaggtcctgctgggcttctgggtctactcgaccctggccatgcagttcgatgccgccagcctCa                                                                                                                                                     <  7:79554‑M1/2‑1 (MQ=255)       aaGTAGATCTTCAGGCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGcag                                                                                                                                              >  3:179516/1‑149 (MQ=255)          tAGATCTTCAGGCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTGAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGcagc                                                                                                                                             >  8:104742/1‑147 (MQ=255)               cTTCAGGCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCtga                                                                                                                                      >  5:165763/1‑149 (MQ=255)               cTTCAGGCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCtga                                                                                                                                      >  2:117289/1‑149 (MQ=255)                  cAGGCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCtgatg                                                                                                                                    >  1:147983/1‑148 (MQ=255)                  cAGGCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCtgat                                                                                                                                     <  6:122495/147‑1 (MQ=255)                   gcggtgggtaatggtgtggctgttcacgctgggcgaaatcgtgcgcgcccgcggccccctgttcggcaaggtcctgatggggttctgggtctactcgaccgtggccatgcagttcgatgccgcccgcctCACCGGCAGCCAGatgatg                                                                                                                                    <  4:77450‑M1/19‑1 (MQ=255)                    ggCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTATTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAAc                                                                                                                                 <  2:27446/149‑1 (MQ=255)                         gAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCAtt                                                                                                                             <  4:179516/148‑1 (MQ=255)                         gAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTc                                                                                                                            <  2:125691/149‑1 (MQ=255)                          aGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCg                                                                                                                           <  7:186802/149‑1 (MQ=255)                               tgCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCAc                                                                                                                       <  7:5855/148‑1 (MQ=255)                               tgCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCAc                                                                                                                       <  6:165763/148‑1 (MQ=255)                                 cTCCGCTGGTCGCTGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAAGCGGCAATTTTTACCACATGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGcagc                                                                                                                                             <  1:92968/125‑1 (MQ=255)                                  tCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTgg                                                                                                                   >  2:48657/1‑149 (MQ=255)                                         gtagcgcTGTTTCGGCCATTATCGTGCTCGCTGATCAGTGTGAACCGGCAA‑TTTTACCAAAGGCGTCATTTTCGGCACGCCCCCATGTCAGCAACAAGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCAAGTGTCGTAcc                                                                                                             <  8:255334/145‑1 (MQ=255)                                         gTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCg                                                                                                            <  2:147983/149‑1 (MQ=255)                                             cgGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGa                                                                                                        <  1:48657/149‑1 (MQ=255)                                               gtgtTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAgg                                                                                                      >  1:222053/1‑149 (MQ=255)                                                  ggcgaaatcgtgcgcgcccgcggcaccctgttcggcaaggtcctgctgggcttctgggtctactcgaccctggccatgcagttcgatgccgccagcctCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAgg                                                                                                      >  3:77450‑M1/99‑147 (MQ=255)                                                    tCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTggc                                                                                                 >  6:156921/1‑149 (MQ=255)                                                      ggCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGTCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTggcg                                                                                                <  6:86026/148‑1 (MQ=255)                                                       gCCATTATCGAGCTCGCTGTTCAGGTTGAACTGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTggcgg                                                                                               >  4:142321/1‑148 (MQ=255)                                                       gCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTggcggc                                                                                              <  6:243994/149‑1 (MQ=255)                                                             aTCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGaa                                                                                        >  5:211411/1‑149 (MQ=255)                                                              tCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAAc                                                                                       <  5:293645/149‑1 (MQ=255)                                                                      gCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATg                                                                                 <  7:258208/147‑1 (MQ=255)                                                                          ttCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCa                                                                             <  5:327037/147‑1 (MQ=255)                                                                          ttCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACAAGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCacg                                                                           >  2:295966/1‑147 (MQ=255)                                                                              ggTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGTCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTc                                                                        >  2:322918/1‑148 (MQ=255)                                                                              ggTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTc                                                                        >  1:50579/1‑148 (MQ=255)                                                                               gTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTc                                                                        >  3:26889/1‑147 (MQ=255)                                                                                   aaCCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAg                                                                     >  1:180784/1‑146 (MQ=255)                                                                                    gcaaggtcctgctgggcttctgggtctactcgaccctggccatgcagttcgatgccgccagcctCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTg                                                                                                   >  8:151040‑M1/65‑116 (MQ=255)                                                                                    gcaaggtcctgctgggcttctgggtctactcgaccctggccatgcagttcgatgccgccagcctCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTg                                                                                                   <  7:151040‑M1/52‑1 (MQ=255)                                                                                     ccGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGAc                                                                >  7:105604/1‑149 (MQ=255)                                                                                      cGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGAcc                                                               >  8:73155/1‑149 (MQ=255)                                                                                      cGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGAcc                                                               >  2:1945/1‑149 (MQ=255)                                                                                       ggCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGAcc                                                               >  4:24876/1‑148 (MQ=255)                                                                                        gCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATg                                                                                 >  3:118484/1‑129 (MQ=255)                                                                                        gCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATg                                                                                 <  4:118484/129‑1 (MQ=255)                                                                                        gCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCa                                                             >  8:138887/1‑149 (MQ=255)                                                                                                   cacaGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCca                                                     >  7:87610/1‑147 (MQ=255)                                                                                                   cacaGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCca                                                     <  8:87610/147‑1 (MQ=255)                                                                                                    acaGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCcagca                                                  <  2:222053/149‑1 (MQ=255)                                                                                                    acaGGCGCCATCTTCGGCACGCCCCCATGGCTGCAACATGGCAAGGCCCACCGGCAGCCAGCCGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGGATGGCCAGGGTCGAGTAGACCCAGAAGCCcagca                                                  <  3:240990/149‑1 (MQ=255)                                                                                                     caGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGTCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCcagcag                                                 <  1:322918/149‑1 (MQ=255)                                                                                                      aGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAgg                                                <  1:11317/149‑1 (MQ=255)                                                                                                        gCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGAc                                              <  7:138887/149‑1 (MQ=255)                                                                                                          gTCATTTTCGGCACGCCCCCATGGCAGAAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGAACGTGGCGTACCAGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCt                                            >  7:48084/1‑149 (MQ=255)                                                                                                              ttttCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGcc                                        <  1:117289/149‑1 (MQ=255)                                                                                                              ttttCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGcc                                        >  3:125331/1‑149 (MQ=255)                                                                                                                   ggCAAGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACa                                   <  3:227734/149‑1 (MQ=255)                                                                                                                     cACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAgg                                 <  5:39292/149‑1 (MQ=255)                                                                                                                     cACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCACCCAGCTGTTGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAgg                                 <  8:48084/149‑1 (MQ=255)                                                                                                                        gCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGACGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTg                              >  5:99702/1‑149 (MQ=255)                                                                                                                          ccccATGGCAGCAACATGGCAAGGCCGACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGcc                            <  8:105604/149‑1 (MQ=255)                                                                                                                          ccccATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGc                                                                               <  2:140138/98‑1 (MQ=255)                                                                                                                          ccccATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGc                                                                               >  1:140138/1‑98 (MQ=255)                                                                                                                              aTGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCgg                        <  2:50579/149‑1 (MQ=255)                                                                                                                                      aaCATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCAc                <  4:26889/149‑1 (MQ=255)                                                                                                                                           ggCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGc                                         <  2:191737/119‑1 (MQ=255)                                                                                                                                           ggCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGc                                         <  2:186852/119‑1 (MQ=255)                                                                                                                                           ggCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGc                                         >  1:191737/1‑119 (MQ=255)                                                                                                                                           ggCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGc                                         >  1:186852/1‑119 (MQ=255)                                                                                                                                            gCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTc          <  7:73155/149‑1 (MQ=255)                                                                                                                                            gCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTc          >  6:305977/1‑149 (MQ=255)                                                                                                                                            gCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTc          >  8:112406/1‑149 (MQ=255)                                                                                                                                             cAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTCg         >  6:64986/1‑149 (MQ=255)                                                                                                                                                ggCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTCGcc       >  8:79554/1‑148 (MQ=255)                                                                                                                                                 gCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCACGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTCGcc       >  8:93711/1‑147 (MQ=255)                                                                                                                                                 gCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTAGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTCGcc       >  1:110242/1‑147 (MQ=255)                                                                                                                                                    CACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTCGCCCAGCg  <  6:246752‑M1/149‑1 (MQ=255)                                                                                                                                                    CACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTCGCCCAGCg  <  6:19800‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     AGCCGGAAGTAGATCTTCAGGCTGGAGGTGTGCTCCGCTGGTCGCGGTGTTTCGGCCATTATCGAGCTCGCTGTTCAGGTTGAACCGGCAA‑TTTTACCACAGGCGTCATTTTCGGCACGCCCCCATGGCAGCAACATGGCAAGGCCCACCGGCAGCCAGCTGATGAACCATTCGGCACGTGGCGTACCGGTGAGGCTGGCGGCATCGAACTGCATGGCCAGGGTCGAGTAGACCCAGAAGCCCAGCAGGACCTTGCCGAACAGGGTGCCGCGGGCGCGCACGATTTCGCCCAGCG  >  NC_002947/5617402‑5617696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.