New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5982735	69 (1.330)	3 (0.060)	3/254	NT	4.5%	coding (3380/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	= 5982793	61 (1.230)					coding (3438/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
Rejected: Frequency below/above cutoff threshold.

CGCCTTCTACATGGGCAATATCCCAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCG  >  NC_002947/5982595‑5982883                                                                                                                                             |                                                                                                                                                     cgcCTTCTACATGGGCAATATCCCAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGcc                                                                                                                                              >  7:62079/1‑149 (MQ=255)   ccTTCTACATGGGCAATATCCCAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCtt                                                                                                                                            <  1:258643/149‑1 (MQ=255)       cTACATGGGCAATATCCCAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGc                                                                                                                                          <  3:171394/147‑1 (MQ=255)             gggCAATATCGCATAGTCCTAGTGCGACCTGGGATTGGCCGGCGACAACTCCTGGTCCGCACGGGCGCACATCAACCTGGACGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAg                                                                                                                                   <  2:306327/148‑1 (MQ=255)             gggCAATATCCCAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGAc                                                                                                                                      <  4:95982/145‑1 (MQ=255)             gggCAATATACCAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGAc                                                                                                                                      >  3:95982/1‑145 (MQ=255)                      cccAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCGCATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTgcgc                                                                                                                             >  3:201655/1‑145 (MQ=255)                      cccAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTgcgc                                                                                                                             <  4:201655/145‑1 (MQ=255)                      cccAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGc                                                                                                                         <  8:594/149‑1 (MQ=255)                       ccAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCt                                                                                                                        >  6:31864/1‑149 (MQ=255)                        cAAAGACCATGCGCGACCTGGCATTGGCCGACGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTg                                                                                                                       >  1:1650/1‑149 (MQ=255)                         aaaGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCt                                                                                                                                 <  8:172968/138‑1 (MQ=255)                         aaaGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCt                                                                                                                                 >  7:172968/1‑138 (MQ=255)                         aaaGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGc                                                                                                                      >  8:100699/1‑149 (MQ=255)                                aTGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGcc                                                                                                                 >  7:183005/1‑147 (MQ=255)                                aTGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGcc                                                                                                                 <  8:183005/147‑1 (MQ=255)                                aTGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCt                                                                                                               <  2:306859/149‑1 (MQ=255)                                   cgcgACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCTGACAAGCTGCGCGAGCTGCAGGCCCTgcg                                                                                                            <  1:25295/149‑1 (MQ=255)                                    gcgACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCGCTgcgc                                                                                                           <  2:101002/149‑1 (MQ=255)                                        ccTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCgcgagc                                                                                                       <  4:36837/149‑1 (MQ=255)                                        ccTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCgcgagc                                                                                                       <  4:32921/149‑1 (MQ=255)                                             cATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTc                                                                                                  <  5:31864/149‑1 (MQ=255)                                             cATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTc                                                                                                  <  7:210045/149‑1 (MQ=255)                                              aTTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGAtt                                                                                                   >  4:229026/1‑147 (MQ=255)                                              aTTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCCAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGAtt                                                                                                   >  6:74625/1‑147 (MQ=255)                                                   ccGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGc                                                                                            >  8:131747/1‑149 (MQ=255)                                                    cGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCt                                                                                           <  8:10236‑M2/149‑2 (MQ=255)                                                    cGGCGACAACACCTGGGCAGCACCGGCGCACATCAACATGGACGACTATCAACTGTTCCGCGGCCTGGCCCTGGGCAGACCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCACTTCGCGAGCGATTCAGCCGCt                                                                                           <  8:5539‑M2/149‑2 (MQ=255)                                                       cGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGTCCACGGCGGCCTTGCCGACAAGCTTCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCtggg                                                                                        <  6:59183‑M2/149‑5 (MQ=255)                                                           aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCAgcggctgaatcgctcgcgcagggcctgcagctcgcgcagcttgtcggcaaggctgccgtgggc                                                                                       >  6:100360‑M1/1‑83 (MQ=255)                                                           aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCAgcggctgaatcgctcgcgcagggcctgcagctcgcgcagcttgtcggcaaggctgccgtgggc                                                                                       <  5:100360‑M1/146‑64 (MQ=255)                                                           aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCgg                                                                                    >  2:79562/1‑149 (MQ=255)                                                           aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCgg                                                                                    >  5:307593/1‑149 (MQ=255)                                                            acacCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCAgcggctgaatcgctcgcgcagggcctgcagctcgcgcagcttgtcggcaaggctgccgtgggcctcg                                                                                   <  4:70987‑M1/149‑68 (MQ=255)                                                            acacCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc                                                                                   <  3:29825/149‑1 (MQ=255)                                                              acCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCgg                                                                                    <  2:299189/146‑1 (MQ=255)                                                              acCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCgg                                                                                    >  1:299189/1‑146 (MQ=255)                                                                cTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTc                                                                                >  3:188863/1‑148 (MQ=255)                                                                   ggCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAAc                                                                             <  7:100699/148‑1 (MQ=255)                                                                         aCCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCa                                                                      >  7:93118/1‑149 (MQ=255)                                                                         aCCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCa                                                                      >  6:248777/1‑149 (MQ=255)                                                                          ccGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGGTTGAAGCCGGccca                                                                     <  1:79562/149‑3 (MQ=255)                                                                          ccGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCAc                                                                     <  7:175690/149‑1 (MQ=255)                                                                             gcgcACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCtt                                                                  <  6:307593/149‑1 (MQ=255)                                                                              cgcACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGGTTGAAGCCGGcccagcgg                                                                 <  8:62079/149‑7 (MQ=255)                                                                               gcACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTcc                                                                >  7:76300/1‑149 (MQ=255)                                                                                  caTCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCgca                                                             <  5:276474/149‑1 (MQ=255)                                                                                          tGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAg                                                     >  8:215756/1‑149 (MQ=255)                                                                                             ccGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCTGCAGCAAGCAGTTg                                                  <  3:229026/149‑1 (MQ=255)                                                                                             ccGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                  <  5:113874/149‑1 (MQ=255)                                                                                              cGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGATCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGc                                                 <  3:168500/149‑1 (MQ=255)                                                                                              cGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCTCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGc                                                 <  7:131747/149‑1 (MQ=255)                                                                                              cGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc                                                                                   >  6:8702/1‑115 (MQ=255)                                                                                                  tATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAAt                                             >  1:170265/1‑149 (MQ=255)                                                                                                    tCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGAt                                                                                                    <  3:249361/92‑1 (MQ=255)                                                                                                    tCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGAt                                                                                                    >  4:249361/1‑92 (MQ=255)                                                                                                       ccTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAgg                                        >  3:146861/1‑149 (MQ=255)                                                                                                        cTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAggg                                       >  5:40500/1‑149 (MQ=255)                                                                                                          gTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCg                                     >  5:141242/1‑149 (MQ=255)                                                                                                           ttCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGt                                    <  8:257885/149‑1 (MQ=255)                                                                                                               gcgGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATc                                <  7:10236/149‑1 (MQ=255)                                                                                                               gcgGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGAGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATc                                <  7:5539/149‑1 (MQ=255)                                                                                                                     tGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAg                          >  5:135111/1‑149 (MQ=255)                                                                                                                      ggCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGc                         >  5:144112/1‑149 (MQ=255)                                                                                                                       gCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                  <  6:225638/123‑1 (MQ=255)                                                                                                                       gCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                  >  5:225638/1‑123 (MQ=255)                                                                                                                        cccTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTc                       >  2:122728/1‑149 (MQ=255)                                                                                                                          cTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCg                      >  3:190684/1‑148 (MQ=255)                                                                                                                             ggCAGCCCCGACGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATGCAGCCGCTGGGTCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAg                   <  4:26294/148‑1 (MQ=255)                                                                                                                                aGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGa               <  5:74625/149‑1 (MQ=255)                                                                                                                                  ccccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACg             <  5:23452/149‑1 (MQ=255)                                                                                                                                  ccccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACg             >  8:28674/1‑149 (MQ=255)                                                                                                                                   cccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACgg            >  2:155151/1‑149 (MQ=255)                                                                                                                                    ccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGc           <  6:144112/149‑1 (MQ=255)                                                                                                                                     cGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCtgggcctcggggctgcccagggccaggccgcggaacaggtgatagtcggccaggttgatgtgcgccggtgcggcccaggtgt          <  4:70987‑M2/149‑83 (MQ=255)                                                                                                                                      gAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCt         <  4:146861/149‑1 (MQ=255)                                                                                                                                         gCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCtgggcctcggggctgcccagggccaggccgcggaacaggtgatagtcggccaggttgatgtgcgccggtgcggcccaggtgtt         >  6:100360‑M2/1‑63 (MQ=255)                                                                                                                                         gCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCtgggcctcggggctgcccagggccaggccgcggaacaggtgatagtcggccaggttgatgtgcgccggtgcggcccaggtgtt         <  5:100360‑M2/146‑84 (MQ=255)                                                                                                                                          cccAgcggctgaatcgctcgcgcagggcctgcagctcgcgaagcttgtcggcaaggccgccgtggacctcggggctgcccagggccaggccgcggaacaggtgatagtcggccaggttgatgtgcgccggtgcggcccaggtgttgtcg     <  6:59183‑M1/149‑146 (MQ=255)                                                                                                                                          cccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGcc     >  7:76639/1‑149 (MQ=255)                                                                                                                                           ccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCATGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcg    >  1:267877/1‑149 (MQ=255)                                                                                                                                           ccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                  >  6:169676/1‑103 (MQ=255)                                                                                                                                           ccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                  <  5:169676/103‑1 (MQ=255)                                                                                                                                           ccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcg    >  2:26665/1‑149 (MQ=255)                                                                                                                                            cACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcgc   <  6:135111/149‑1 (MQ=255)                                                                                                                                            cACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcgc   >  8:42715/1‑149 (MQ=255)                                                                                                                                             agcggctgaatcgctcgcgcagggcctgcagctcgcgcagcttgtcggcaaggctgccgtgggcctcggggctgcccagggccaggccgcggaacaggtgatagtcggccaggttgatgtgcgccggtgcggcccaggtgttgtcgccg  <  8:10236‑M1/149‑149 (MQ=255)                                                                                                                                             agcggctgaatcgctcgcgaagtgcctgcagctcgcgcagcttgtcggcaaggctgccgtgggcctcgggtctgcccagggccaggccgcggaacagttgatagtcgtccatgttgatgtgcgccggtgctgcccaggtgttgtcgccg  <  8:5539‑M1/149‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                     CGCCTTCTACATGGGCAATATCCCAAAGACCATGCGCGACCTGGCATTGGCCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCG  >  NC_002947/5982595‑5982883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.