New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5982735	69 (1.330)	3 (0.060)	3/254	NT	4.5%	coding (3380/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	= 5982793	61 (1.230)					coding (3438/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
Rejected: Frequency below/above cutoff threshold.

CCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATCC  >  NC_002947/5982645‑5982935                                                                                                                                                     |                                                                                                                                               ccGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGc                                                                                                                                                >  8:131747/1‑149 (MQ=255)  cGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCt                                                                                                                                               <  8:10236‑M2/149‑2 (MQ=255)  cGGCGACAACACCTGGGCAGCACCGGCGCACATCAACATGGACGACTATCAACTGTTCCGCGGCCTGGCCCTGGGCAGACCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCACTTCGCGAGCGATTCAGCCGCt                                                                                                                                               <  8:5539‑M2/149‑2 (MQ=255)     cGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGTCCACGGCGGCCTTGCCGACAAGCTTCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCtggg                                                                                                                                            <  6:59183‑M2/149‑5 (MQ=255)         aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCgg                                                                                                                                        >  2:79562/1‑149 (MQ=255)         aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCgg                                                                                                                                        >  5:307593/1‑149 (MQ=255)          acacCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc                                                                                                                                       <  3:29825/149‑1 (MQ=255)            acCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCgg                                                                                                                                        <  2:299189/146‑1 (MQ=255)            acCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCgg                                                                                                                                        >  1:299189/1‑146 (MQ=255)              cTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTc                                                                                                                                    >  3:188863/1‑148 (MQ=255)                 ggCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAAc                                                                                                                                 <  7:100699/148‑1 (MQ=255)                       aCCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCa                                                                                                                          >  7:93118/1‑149 (MQ=255)                       aCCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCa                                                                                                                          >  6:248777/1‑149 (MQ=255)                        ccGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGGTTGAAGCCGGccca                                                                                                                         <  1:79562/149‑3 (MQ=255)                        ccGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCAc                                                                                                                         <  7:175690/149‑1 (MQ=255)                           gcgcACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCtt                                                                                                                      <  6:307593/149‑1 (MQ=255)                            cgcACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGGTTGAAGCCGGcccagcgg                                                                                                                     <  8:62079/149‑7 (MQ=255)                             gcACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTcc                                                                                                                    >  7:76300/1‑149 (MQ=255)                                caTCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCgca                                                                                                                 <  5:276474/149‑1 (MQ=255)                                        tGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAg                                                                                                         >  8:215756/1‑149 (MQ=255)                                           ccGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCTGCAGCAAGCAGTTg                                                                                                      <  3:229026/149‑1 (MQ=255)                                           ccGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                                                                      <  5:113874/149‑1 (MQ=255)                                            cGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGATCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGc                                                                                                     <  3:168500/149‑1 (MQ=255)                                            cGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCTCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGc                                                                                                     <  7:131747/149‑1 (MQ=255)                                            cGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc                                                                                                                                       >  6:8702/1‑115 (MQ=255)                                                tATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAAt                                                                                                 >  1:170265/1‑149 (MQ=255)                                                     ccTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAgg                                                                                            >  3:146861/1‑149 (MQ=255)                                                      cTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAggg                                                                                           >  5:40500/1‑149 (MQ=255)                                                        gTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCg                                                                                         >  5:141242/1‑149 (MQ=255)                                                         ttCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGt                                                                                        <  8:257885/149‑1 (MQ=255)                                                             gcgGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATc                                                                                    <  7:10236/149‑1 (MQ=255)                                                             gcgGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGAGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATc                                                                                    <  7:5539/149‑1 (MQ=255)                                                                   tGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAg                                                                              >  5:135111/1‑149 (MQ=255)                                                                    ggCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGc                                                                             >  5:144112/1‑149 (MQ=255)                                                                     gCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                                                                      >  5:225638/1‑123 (MQ=255)                                                                     gCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                                                                      <  6:225638/123‑1 (MQ=255)                                                                      cccTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTc                                                                           >  2:122728/1‑149 (MQ=255)                                                                        cTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCg                                                                          >  3:190684/1‑148 (MQ=255)                                                                           ggCAGCCCCGACGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATGCAGCCGCTGGGTCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAg                                                                       <  4:26294/148‑1 (MQ=255)                                                                              aGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGa                                                                   <  5:74625/149‑1 (MQ=255)                                                                                ccccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACg                                                                 <  5:23452/149‑1 (MQ=255)                                                                                ccccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACg                                                                 >  8:28674/1‑149 (MQ=255)                                                                                 cccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACgg                                                                >  2:155151/1‑149 (MQ=255)                                                                                  ccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGc                                                               <  6:144112/149‑1 (MQ=255)                                                                                   cGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCtgggcctcggggctgcccagggccaggccgcggaacaggtgatagtcggccaggttgatgtgcgccggtgcggcccaggtgt                                                              <  4:70987‑M2/149‑83 (MQ=255)                                                                                    gAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCt                                                             <  4:146861/149‑1 (MQ=255)                                                                                       gCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCtgggcctcggggctgcccagggccaggccgcggaacaggtgatagtcggccaggttgatgtgcgccggtgcggcccaggtgtt                                                             >  6:100360‑M2/1‑63 (MQ=255)                                                                                       gCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCtgggcctcggggctgcccagggccaggccgcggaacaggtgatagtcggccaggttgatgtgcgccggtgcggcccaggtgtt                                                             <  5:100360‑M2/146‑84 (MQ=255)                                                                                        cccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGcc                                                         >  7:76639/1‑149 (MQ=255)                                                                                         ccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCATGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcg                                                        >  1:267877/1‑149 (MQ=255)                                                                                         ccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                                                                      >  6:169676/1‑103 (MQ=255)                                                                                         ccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTg                                                                                                      <  5:169676/103‑1 (MQ=255)                                                                                         ccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcg                                                        >  2:26665/1‑149 (MQ=255)                                                                                          cACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcgc                                                       >  8:42715/1‑149 (MQ=255)                                                                                          cACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcgc                                                       <  6:135111/149‑1 (MQ=255)                                                                                              gCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGc                                                                                                                            >  2:148337/1‑76 (MQ=255)                                                                                              gCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGc                                                                                                                            <  1:148337/76‑1 (MQ=255)                                                                                                aGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCg                                                 <  6:40500/149‑1 (MQ=255)                                                                                                       ccGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCATCCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCTAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCtt                                           <  5:59183/148‑1 (MQ=255)                                                                                                       ccGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCtt                                           <  4:188863/148‑1 (MQ=255)                                                                                                       ccGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTc                                          <  7:215756/149‑1 (MQ=255)                                                                                                        cGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTc                                          >  5:265235/1‑148 (MQ=255)                                                                                                             aGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAg                                    <  8:93118/149‑1 (MQ=255)                                                                                                                      aGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATc                           >  5:195587/1‑149 (MQ=255)                                                                                                                         tGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATcgcc                        >  3:38269/1‑149 (MQ=255)                                                                                                                          gCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATcgccg                       >  7:190654/1‑149 (MQ=255)                                                                                                                           cAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCCTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGACGCGATCCGCTGCTTCGACCAGGCGCAAATcgccgc                      >  3:235601/1‑149 (MQ=255)                                                                                                                             ggCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCa                    <  6:195587/149‑1 (MQ=255)                                                                                                                                  tGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCCACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCt               >  1:40108/1‑149 (MQ=255)                                                                                                                                      cgagcgaTTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCg           >  7:250072/1‑149 (MQ=255)                                                                                                                                        agcgaTTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGc         <  7:28674/149‑1 (MQ=255)                                                                                                                                        agcgaTTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGc         <  2:170265/149‑1 (MQ=255)                                                                                                                                               cAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATc   <  6:141242/148‑1 (MQ=255)                                                                                                                                                aGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATcc  <  8:76639/148‑1 (MQ=255)                                                                                                                                                 gCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATc   >  7:121264/1‑146 (MQ=255)                                                                                                                                                 gCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATc   <  8:121264/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                               CCGGCGACAACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATCC  >  NC_002947/5982645‑5982935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.