New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 965454	45 (0.860)	4 (0.080)	4/250	NT	9.5%	coding (436/768 nt)	ptxC	phosphonate transport system permease PtxC
	?	NC_002947	= 965474	34 (0.700)					coding (456/768 nt)	ptxC	phosphonate transport system permease PtxC

TGCCATTCCTGAACTGGTGTGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGAACAACATCCGCATGGCCAGCG  >  NC_002947/965345‑965622                                                                                                                                  |                                                                                                                                                     tGCCATTCCTGCACTGGTGTGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCcgg                                                                                                                                   <  4:65772/149‑1 (MQ=255)   ccATTCCTGAACTGGTGTGGGGTTCGCTGACTGTGGATGCGGCTGGGCTGGGGCGGAATGCGGGTACCCTGGCTGTGGCGTTGCTCACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCGCCGCCCGAGCcggc                                                                                                                                  <  5:103689/148‑1 (MQ=255)     aTTCCTGAACTGGTGTGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCcggcggc                                                                                                                               >  3:160518/1‑149 (MQ=255)                 gtgtGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCTCACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGATCGCCCCGCCCGAGCCGGCGGCGGCGATCCGttt                                                                                                                   >  4:258107/1‑149 (MQ=255)                         aGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAggggg                                                                                                           >  8:237189/1‑149 (MQ=255)                         aGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAggggg                                                                                                           <  6:52882/149‑1 (MQ=255)                              tGACTGTGCTGGCGGCTGGGCGGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGc                                                                                                      <  2:252236/149‑1 (MQ=255)                                     gCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTgg                                                                                               >  2:312169/1‑149 (MQ=255)                                      cTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTggc                                                                                              >  6:225881/1‑149 (MQ=255)                                         gcggcTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTggcggc                                                                                           <  3:222186/149‑1 (MQ=255)                                                     gggCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTg                                                                                <  4:143642/148‑1 (MQ=255)                                                                    aCCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCt                                                                >  6:328463/1‑149 (MQ=255)                                                                        tGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTgg                                                                               <  2:258936/130‑1 (MQ=255)                                                                        tGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTgg                                                                               >  1:258936/1‑130 (MQ=255)                                                                          gCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGc                                                           <  5:285060/148‑1 (MQ=255)                                                                           cTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTggcggc                                                                                           >  2:193929/1‑115 (MQ=255)                                                                           cTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTggcgg                                                                                            <  2:115190/114‑1 (MQ=255)                                                                           cTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTggcgg                                                                                            >  1:115190/1‑114 (MQ=255)                                                                                gCGTTGCTCACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGt                                                     <  3:258107/148‑1 (MQ=255)                                                                                gCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGtt                                                    >  1:25594/1‑149 (MQ=255)                                                                                gCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGtt                                                    <  1:312169/149‑1 (MQ=255)                                                                                  gTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGc                                                  <  4:160518/149‑1 (MQ=255)                                                                                     tctcaccggTGGCGTGCTGGGGCGTTTTTTTGCCGTGGCGCTTTATaacccccacgcacgccagcggtgtgcaacgccaaagccagggtaccggcattcggccccagcccagccgccagcacagtcagcgctgcccacaccagttcag                                                >  6:323405‑M2/4‑46 (MQ=255)                                                                                     gCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCt                                                 >  6:315437/1‑147 (MQ=255)                                                                                     gCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCt                                                 <  5:315437/147‑1 (MQ=255)                                                                                         acCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGaacgccccagcacgccagcggtgtgcaacgccaaagccagggtaccggcattcggccccagcccagccgccagcacagtcagcgctgcccacaacagttcag                                                <  5:323405‑M2/144‑103 (MQ=255)                                                                                         acCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTa                                           <  2:170088/149‑1 (MQ=255)                                                                                           cGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTa                                           >  1:19722/1‑147 (MQ=255)                                                                                              tGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCt                                      >  2:220567/1‑149 (MQ=255)                                                                                                        gggCGTTTGTTTGCCGAGGCGCTTGAGaacgccccagcacgccagcggtgtgcaacgccaaagccagggtaccggcattcggccccagccca                                                                                     <  5:313949‑M2/92‑66 (MQ=255)                                                                                                        gggCGTTTGTTTGCCGAGGCGCTTGAGaacgccccagcacgccagcggtgtgcaacgccaaagccagggtaccggcattcggccccagccca                                                                                     >  6:313949‑M2/1‑27 (MQ=255)                                                                                                        gggCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTg                            <  5:328463/149‑1 (MQ=255)                                                                                                        gggCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGGTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTg                            <  5:225881/149‑1 (MQ=255)                                                                                                        gggCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGAAGGGGGGCAGCCAGTTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACATGTGGCCGAAGTTGCTGGACTACAGCATGAACCGcag                            >  4:47021/1‑147 (MQ=255)                                                                                                                gtttgCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGaac                     <  7:237189/148‑1 (MQ=255)                                                                                                                      cGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTg                                                <  2:301873/115‑1 (MQ=255)                                                                                                                      cGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTg                                                >  1:301873/1‑115 (MQ=255)                                                                                                                            gcTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGAACAACATCCGCATgg        >  3:295682/1‑149 (MQ=255)                                                                                                                                  gaACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGAACAACATCCGCATGGCCAGCg  >  5:76799/1‑149 (MQ=255)                                                                                                                                  gaACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGAACAACATCCGCATGGCCAGCg  >  3:62954/1‑149 (MQ=255)                                                                                                                                  |                                                                                                                                                     TGCCATTCCTGAACTGGTGTGGGCAGCGCTGACTGTGCTGGCGGCTGGGCTGGGGCCGAATGCCGGTACCCTGGCTTTGGCGTTGCACACCGCTGGCGTGCTGGGGCGTTTGTTTGCCGAGGCGCTTGAGAACGCCCCGCCCGAGCCGGCGGCGGCGATCCGTTTGCAGGGGGGCAGCCAGGTGGCGGCGTTCTGCTTTGGTACCCTGCCCAACCTGTGGCCGCAGTTGCTGGCCTACAGCTTGTACCGCTGGGAGAACAACATCCGCATGGCCAGCG  >  NC_002947/965345‑965622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.