New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1404731 =46 (0.880)3 (0.060) 3/252 NT 6.5% coding (951/2067 nt) PP_1228 methyl‑accepting chemotaxis transducer
?NC_002947 1404824 = 43 (0.870)coding (858/2067 nt) PP_1228 methyl‑accepting chemotaxis transducer

AGGTTGGCGTTCTGGTTATGGGCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCTCAGTTGCTGCAG  >  NC_002947/1404678‑1404967
                                                                                                                                                    |                                                                                                                                               
aGGTTGGCGTTCTGGTTATGGGCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGt                                                                                                                                                <  7:138340/148‑1 (MQ=255)
            tGGTTATGGGCATCACGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGAc                                                                                                                                     <  7:207737/147‑1 (MQ=255)
            tGGTTATGGGCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACtt                                                                                                                                   >  3:255818/1‑149 (MQ=255)
            tGGTTATGGGCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACtt                                                                                                                                   >  5:136604/1‑149 (MQ=255)
             cagcgtgctcggcaagcccatggacaagtcggtagccgacGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCgg                                                                                                                                             <  4:38352‑M1/98‑1 (MQ=255)
             cagcgtgctcggcaagcccatggacaagtcggtagccgacGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCgg                                                                                                                                             >  3:38352‑M1/41‑138 (MQ=255)
              gTTATGGGCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCCCGCGCAGCAGGCCGTCGGCTACCgcc                                                                                                                                     >  8:207737/1‑143 (MQ=255)
              gTTATGGGCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCg                                                                                                                                              <  8:90336/136‑1 (MQ=255)
              gTTATGGGCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCg                                                                                                                                              >  7:90336/1‑136 (MQ=255)
                     gCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATggg                                                                                                                          >  6:306597/1‑149 (MQ=255)
                     gCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGCCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATggg                                                                                                                          <  3:24292/149‑1 (MQ=255)
                         cAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCtt                                                                                                                       >  1:39708/1‑149 (MQ=255)
                          aaGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGc                                                                                                                     <  8:245896/149‑1 (MQ=255)
                               gcTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGc                                                                                                                >  2:272041/1‑149 (MQ=255)
                                    ttGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCt                                                                                                           <  4:255818/149‑1 (MQ=255)
                                       aGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGc                                                                                                                >  7:184318/1‑141 (MQ=255)
                                       aGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGc                                                                                                                <  8:184318/141‑1 (MQ=255)
                                        gggCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTgtcg                                                                                                       >  3:194079/1‑149 (MQ=255)
                                            gACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTcgc                                                                                                   >  3:264262/1‑149 (MQ=255)
                                                  ccgacggcctgctgcgcgtggcccaccccttcacgccaatccctgacacagccccgtggcaggtagtgctggaactgccggaaagcgtgctgcaggccGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTg                                                                                                          <  4:38352‑M2/40‑1 (MQ=255)
                                                  ccgacggcctgctgcgcgtggcccaccccttcacgccaatccctgacacagccccgtggcaggtagtgctggaactgccggaaagcgtgctgcaggccGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTg                                                                                                          >  3:38352‑M2/99‑138 (MQ=255)
                                                     GGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGc                                                                                          >  1:32968‑M1/1‑149 (MQ=255)
                                                      GCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGcc                                                                                         >  6:170257‑M1/1‑149 (MQ=255)
                                                                cgcgtggcccaccccttcacgccaatccctgacacagccccgtggcaggtagtgctggaactgccggaaagcgtgctgcaggccGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCcag                                                                                   >  7:151141‑M2/85‑147 (MQ=255)
                                                                    tttCCGGCACTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGATCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGCCcg                                                                            >  4:258422/1‑149 (MQ=255)
                                                                        cGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCcggcgg                                                                        >  4:95950/1‑149 (MQ=255)
                                                                            aGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGt                                                                    >  5:299241/1‑149 (MQ=255)
                                                                            aGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGt                                                                    >  1:323614/1‑149 (MQ=255)
                                                                              ttCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTgg                                                                  >  8:227579/1‑149 (MQ=255)
                                                                              gtCCAGCACTACCTGCCCCGGGGCTGTGTCAGGGATTGGCGTGAAGGGGGGGGCCACGCGCAGCAGGCCGGCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGGCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTgg                                                                  <  4:194079/148‑1 (MQ=255)
                                                                                ccAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGGCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGc                                                                 <  7:207054/148‑1 (MQ=255)
                                                                                 cAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGa                                                               >  1:288733/1‑149 (MQ=255)
                                                                                 cAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGa                                                               >  2:229399/1‑149 (MQ=255)
                                                                                   gCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATg                                                             >  2:300206/1‑149 (MQ=255)
                                                                                      cTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTc                                                          >  2:211073/1‑149 (MQ=255)
                                                                                        aCCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCa                                                         >  1:239517/1‑149 (MQ=255)
                                                                                          cTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCAcct                                                      >  2:232422/1‑149 (MQ=255)
                                                                                           tGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGt                                                                    >  4:43391/1‑134 (MQ=255)
                                                                                                  gggCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCAcctggccctgg                                              >  5:156653/1‑149 (MQ=255)
                                                                                                     cTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCg                                           >  3:164767/1‑149 (MQ=255)
                                                                                                      tgtgTCAGGGATTGGCGTGAAGGGGTGGGCCACGCACAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCAc                                                        >  1:68394/1‑135 (MQ=255)
                                                                                                      tgtgTCAGGGATTGGCGTGAAGGGGTGGGCCACGCACAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCAc                                                        <  2:68394/135‑1 (MQ=255)
                                                                                                          tCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGaa                                      <  3:79079/149‑1 (MQ=255)
                                                                                                             gggATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGACTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGaa                                      >  8:208543/1‑146 (MQ=255)
                                                                                                               gATTGGCGTGAAGTGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGaa                                      >  6:179435/1‑144 (MQ=255)
                                                                                                                aTTGGCGTGAAGGGGGGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCGGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATc                                <  3:258422/149‑1 (MQ=255)
                                                                                                                   ggCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATcgcg                             >  2:135138/1‑149 (MQ=255)
                                                                                                                         aaGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGcc                       <  2:288733/149‑1 (MQ=255)
                                                                                                                              gTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGTCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCa                  >  6:182276/1‑149 (MQ=255)
                                                                                                                              gTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCa                  >  1:44634/1‑149 (MQ=255)
                                                                                                                                    cACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCt              >  7:249032/1‑147 (MQ=255)
                                                                                                                                    cACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCTCa            <  2:44634/149‑1 (MQ=255)
                                                                                                                                    cACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCTCa            <  1:229399/149‑1 (MQ=255)
                                                                                                                                           cagcagGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCTCAGTtgct      <  1:300206/149‑1 (MQ=255)
                                                                                                                                               aggccGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCTCAGTTGCTGCAg  >  7:181769‑M2/6‑149 (MQ=255)
                                                                                                                                               aggccGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCTCAGTTGCTGCAg  <  6:136604‑M2/144‑1 (MQ=255)
                                                                                                                                               aggccGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCTCAGTTGCTGCAg  >  3:293011‑M2/6‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
AGGTTGGCGTTCTGGTTATGGGCATCAAGGCGCTGGTTGAGGGCGACAGCAGGGGCCTGCAGCACGCTTTCCGGCAGTTCCAGCACTACCTGCCACGGGGCTGTGTCAGGGATTGGCGTGAAGGGGTGGGCCACGCGCAGCAGGCCGTCGGCTACCGACTTGTCCATGGGCTTGCCGAGCACGCTGTCGTCGCGACTGTTGCCGGCCAGCAGGCCGGCGGCGGTGGCGATGCTCACCTGGCCCTGGCCGTCGAACAGATCGCGGCGGCCGTTCACGCTCAGTTGCTGCAG  >  NC_002947/1404678‑1404967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.