New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2082746 =	41 (0.790)	3 (0.060)	3/258	NT	6.9%	coding (488/954 nt)	PP_1861	LysR family transcriptional regulator
	?	NC_002947	2082808 =	41 (0.810)					coding (426/954 nt)	PP_1861	LysR family transcriptional regulator

CGGGCAGTTCGCTGGGGCAGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCGGATCAGGC  >  NC_002947/2082660‑2082950                                                                                                                                                      |                                                                                                                                               cGGGCAGTTCGCTGGGGCAGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGccc                                                                                                                                                <  2:306840/149‑1 (MQ=255)    ccgacttcctgggggcctacccgggactggacgtgcaactgcggttgatcgacagctttgtcgacctgcagggcagccacctgGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGGCGACCTCGCCCAg                                                                                                                                              >  3:197646‑M1/84‑148 (MQ=255)     cAGTTCGCTGGGGCAGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGt                                                                                                                                            <  6:88768/149‑1 (MQ=255)       gTTCGCTGGGGCTGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTgg                                                                                                                                          <  2:302148/149‑1 (MQ=255)       gTTCGCTGGGGCAGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTgg                                                                                                                                          <  4:113275/149‑1 (MQ=255)          cGCTGGGGCAGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCt                                                                                                                                        <  3:292122/148‑1 (MQ=255)            ctggtggcctacccgggactggacgtgcaactgcggttgatcgacagctttgtcgacctgcagggcagccacctgGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGc                                                                                                                                      >  5:74888‑M1/76‑148 (MQ=255)            cTGGGGCAGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGcc                                                                                                                                     >  5:271263/1‑149 (MQ=255)                ggCAGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCGCCGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTg                                                                                                                                  <  1:58080/149‑1 (MQ=255)                   aGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCAATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGCCCTCGCCCAGGTGGCTGCCCTGCAgg                                                                                                                              >  1:70950/1‑149 (MQ=255)                     gTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTc                                                                                                                            <  5:190169/149‑1 (MQ=255)                           aTGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACa                                                                                                                        >  5:48242/1‑147 (MQ=255)                                 cgGCTGGCCATGGAGGCGGGGCGGGCGCACGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTc                                                                                                                <  2:70950/149‑1 (MQ=255)                                 cgGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTc                                                                                                                >  3:124331/1‑149 (MQ=255)                                         cAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAAcc                                                                                                        >  1:72440/1‑149 (MQ=255)                                            gTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCa                                                                                                     <  7:241851/149‑1 (MQ=255)                                                gCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGt                                                                                                                 <  3:135034/133‑1 (MQ=255)                                                gCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGt                                                                                                                 >  4:135034/1‑133 (MQ=255)                                                  agggCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCTGCGTGGCGACCAGGCTGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGc                                                                                                <  3:171404/147‑1 (MQ=255)                                                     gCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACGAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGt                                                                                            <  2:152693/149‑1 (MQ=255)                                                         gcgcAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCa                                                                                         <  8:129668/148‑1 (MQ=255)                                                           gcAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAAGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTc                                                                                      >  8:59385/1‑149 (MQ=255)                                                                cGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCggg                                                                                 <  8:255759/149‑1 (MQ=255)                                                                             gcagccacctgggcgaggtcgacctggtgctgcgcgccggccccttggccgacacccgcctggtcgccacgccCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAg                                                                      >  5:74888‑M2/74‑148 (MQ=255)                                                                                 gCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTc                                                                >  7:187650/1‑149 (MQ=255)                                                                                   gAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCgg                                                              <  6:48242/149‑1 (MQ=255)                                                                                     ctgggcgaggtcgccctggtgctgcgcgccggccccttggccgacacccgcctggtcgccacgccCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCCCCAGGAAGTCgg                                                              >  3:197646‑M2/66‑148 (MQ=255)                                                                                       GGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAAt                                                          >  8:73393‑M1/1‑149 (MQ=255)                                                                                       GGCGTGGCGACCAGGCGGGGGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAAt                                                          >  8:117604‑M1/1‑149 (MQ=255)                                                                                                  acgtggtgctgcgcgccggccccttggccgacacccgcctggtcgccacgccCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGcc                                                <  6:74888‑M2/97‑1 (MQ=255)                                                                                                   aGGCGGGTGTCGGCCTAGGCGCCGGCG‑CGCAGCACCTGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGGTGCACGTCCAGTCCCGGGTAGCCCACCAGGAAGGCGGCAATGGCCGGGGCCAg                                              <  7:122968/149‑1 (MQ=255)                                                                                                     gCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGt                                            <  8:187650/149‑1 (MQ=255)                                                                                                         gtgtCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTggcg                                        >  2:322255/1‑149 (MQ=255)                                                                                                           gtCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTggcggc                                      <  4:124331/149‑1 (MQ=255)                                                                                                                  aaGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCaaa                               <  6:271263/149‑1 (MQ=255)                                                                                                                      ggCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAAcgcg                           <  8:127207/149‑1 (MQ=255)                                                                                                                      ggCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAAcgcg                           <  5:299224/149‑1 (MQ=255)                                                                                                                           gcg‑cgcAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAgg                      <  2:220074/149‑1 (MQ=255)                                                                                                                            cg‑cgcAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGGCGACAAAGCTGTCGATCAACCGCAGTTGCACGGCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAggg                     <  7:181939/149‑1 (MQ=255)                                                                                                                            cg‑cgcAGCACCAGGTCGACCTCGCCCAAGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAggg                     <  7:59385/149‑1 (MQ=255)                                                                                                                                  agcaCCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAg                                              <  5:235334/119‑1 (MQ=255)                                                                                                                                  agcaCCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAg                                              >  6:235334/1‑119 (MQ=255)                                                                                                                                   gcaCCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAAGCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTc                >  6:164877/1‑148 (MQ=255)                                                                                                                                      ccAGGTCGACCTCGCCCAGGTGGCTGCCCTCCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATg            >  1:26921/1‑149 (MQ=255)                                                                                                                                       cAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGc           <  4:169663/149‑1 (MQ=255)                                                                                                                                       cAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGc           >  4:29785/1‑149 (MQ=255)                                                                                                                                          gTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCgg         >  3:7292/1‑148 (MQ=255)                                                                                                                                          gTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCgg         <  4:7292/148‑1 (MQ=255)                                                                                                                                          gTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCGGa        >  8:134535/1‑149 (MQ=255)                                                                                                                                           tCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCGGAt       >  1:294490/1‑149 (MQ=255)                                                                                                                                              aCCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCGGATCAg    <  3:54368/149‑1 (MQ=255)                                                                                                                                               ccTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATg                                                         <  2:37886/95‑1 (MQ=255)                                                                                                                                               ccTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATg                                                         >  1:37886/1‑95 (MQ=255)                                                                                                                                               ccTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCGGATCAgg   <  5:262499/149‑1 (MQ=255)                                                                                                                                               ccTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCGGATCAgg   >  8:30622/1‑149 (MQ=255)                                                                                                                                                cTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGTCAAACGCGGCAGGGGCGTCGATGCGGATCAGGc  <  2:72440/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                               CGGGCAGTTCGCTGGGGCAGGTGGGGATGCCGCGGCTGGCCAGGTAGGCGGGGCTGGCGCAGGCGATGCGCACCATGTAGGCGAGCGGCGTGGCGACCAGGCGGGTGTCGGCCAAGGGGCCGGCG‑CGCAGCACCAGGTCGACCTCGCCCAGGTGGCTGCCCTGCAGGTCGACAAAGCTGTCGATCAACCGCAGTTGCACGTCCAGTCCCGGGTAGGCCACCAGGAAGTCGGCAATGGCCGGGGCCAGGTGGCGGCGGCCAAACGCGGCAGGGGCGTCGATGCGGATCAGGC  >  NC_002947/2082660‑2082950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.