New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2990163 =	29 (0.560)	3 (0.060)	3/254	NT	7.1%	coding (1317/2169 nt)	vgrG‑I	type VI secretion system protein
	?	NC_002947	= 4612508	51 (1.030)					intergenic (+1470/‑637)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein

CCCTGGGACCGCGAAAGCCAGAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAG  >  NC_002947/4612363‑4612656                                                                                                                                                  |                                                                                                                                                     cccTGGGACCGCGAAAGCCAGAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGAc                                                                                                                                                     <  5:226981‑M2/147‑2 (MQ=255)  ccTGGGACCGCGAAAGCCAGAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGAGGTGATCGTCGATTACGTCACAGGCGACCCCGAccag                                                                                                                                                  <  4:200852‑M2/149‑5 (MQ=255)  ccTGGGACCGCGAAAGCCAGAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGAccag                                                                                                                                                  <  5:269037‑M2/149‑5 (MQ=255)       gACCGCGAAAGCCAGAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCgat                                                                                                                                             >  1:242092/1‑149 (MQ=37)         ccGCGAAAGCCAGAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCgatga                                                                                                                                           >  6:320211/1‑149 (MQ=37)               aaGCCAGAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCg                                                                                                                                     <  4:93319/149‑1 (MQ=37)                     gAACAACGAGTTCCGTGCGTGCGGGCGGCGGGTGTCTCACGGCGGGGCGGGCGGCAGCGGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCa                                                                                                                               <  1:10268/149‑1 (MQ=11)                     gAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCa                                                                                                                               <  8:254588/149‑1 (MQ=40)                        caacGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACt                                                                                                                             >  3:127253/1‑148 (MQ=255)                        caacGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACt                                                                                                                             >  5:21508/1‑148 (MQ=255)                                  agttcGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGa                                                                                                                  <  2:142514/149‑1 (MQ=255)                                   gttcGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGt                                                                                                                    >  6:1722/1‑146 (MQ=255)                                   gttcGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGt                                                                                                                    <  5:1722/146‑1 (MQ=255)                                   gttcGTGCGGGCTGCGGGTGTCTCATGGCGGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGAGAc                                                                                                                 <  7:289881/149‑1 (MQ=255)                                       gTGCTGGCTGCGGGTGTCTCAAGGCGGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCaa                                                                                                              <  4:246260/148‑1 (MQ=255)                                        tGCTGGCTGCGGGGGTCTCAAGGCTGGGCGGGGGGCAGCTGTGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACt                                                                                                            <  5:276550/149‑1 (MQ=255)                                                    gtgtCTCAAGGCTGGTCGGGGGGCAGATGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACACAGACCAGCCGATGATCACCGCGCGCACTTACTGCGGTGCCCAACTGCCGCCTTACGa                                                                                                >  6:196153/1‑149 (MQ=17)                                                       tctcAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCt                                                                                             <  6:84716/149‑1 (MQ=255)                                                         tcAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCAACCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGAACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGc                                                                                           >  5:319131/1‑149 (MQ=255)                                                           aaGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGccc                                                                                         >  4:263359/1‑149 (MQ=255)                                                           aaGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGcc                                                                                          <  6:21508/148‑1 (MQ=255)                                                              gCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGAccagccttgagacacccgcagccagcacgaactgaactcgttgttctggctttcgcggtcccag                                                                                      <  1:43818‑M2/149‑65 (MQ=255)                                                              gCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGAt                                                                                      <  6:280662/149‑1 (MQ=255)                                                                  ggCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATca                                                                                    <  2:242092/147‑1 (MQ=255)                                                                     ggggggCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACaaaa                                                                               <  3:95645/149‑1 (MQ=255)                                                                     ggggggCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACaaaa                                                                               <  5:320211/149‑1 (MQ=255)                                                                     ggggggCAGATGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACaaaa                                                                               <  3:200852/149‑1 (MQ=255)                                                                          gCAGCGGGGGCGCGATGGCCATCCCTCGGATCGTCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGc                                                                          <  8:231909/149‑1 (MQ=255)                                                                            aGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCAt                                                                        >  7:261829/1‑149 (MQ=255)                                                                            aGCTGGGGCTCGATGGCCATCCCCCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGAtcagccttgagacacccgcagccagcacgaactgaactcgttgttctggctttcgcggtcccaggggaaactgacttt                                                                        >  3:194522‑M2/1‑71 (MQ=255)                                                                                ggggCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGAc                                                                     >  6:12865/1‑148 (MQ=255)                                                                                   gCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGTCGACCCCGAACAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCAt                                                                  >  5:101496/1‑148 (MQ=255)                                                                                       gATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCaa                                                               <  8:261829/147‑1 (MQ=255)                                                                                               tCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGc                                                                                                                       >  1:240305/1‑83 (MQ=255)                                                                                               tCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGc                                                                                                                       <  2:240305/83‑1 (MQ=255)                                                                                                   tCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCCCCGGGCGCACTTACTGCGGTGACCACCTGCCGCCTTACGATCTGCCCGATCACAACACGCGCATGACCATCAAGAGCCCGACCcac                                                  >  4:250382/1‑148 (MQ=18)                                                                                                      gATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAgg                                              <  5:12865/149‑1 (MQ=255)                                                                                                        tCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGAccagccttgagacacccgcagccagcacgaactgaactcgttgttctggctttcgcggtcccaggggaaactgacttttacccggccccattcatcgcagtagatt                                            >  2:43818‑M2/1‑43 (MQ=255)                                                                                                           gCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGaa                                         <  4:278057/149‑1 (MQ=255)                                                                                                              aGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGt                                      >  7:20995/1‑149 (MQ=255)                                                                                                                gACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGttt                                    >  3:253549/1‑149 (MQ=255)                                                                                                                  cGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTc                                   <  4:127253/148‑1 (MQ=255)                                                                                                                   gTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCaa                                 >  1:55223/1‑149 (MQ=255)                                                                                                                    tGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAAc                                >  7:50587/1‑149 (MQ=255)                                                                                                                     gATCATCCATTACGTCAATGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCaag                                >  4:218695/1‑147 (MQ=255)                                                                                                                     gATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGc                                                                          <  3:263895/106‑1 (MQ=255)                                                                                                                     gATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGc                                                                          >  4:263895/1‑106 (MQ=255)                                                                                                                      atcatcCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGACAGACCCACAAGGGGGAAGGTTTCAAc                                >  2:280139/1‑147 (MQ=255)                                                                                                                       tcatcCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGAc                                                                     <  6:186259/109‑1 (MQ=255)                                                                                                                       tcatcCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGAc                                                                     >  5:186259/1‑109 (MQ=255)                                                                                                                       tcatcCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAg                             <  8:66345/149‑1 (MQ=255)                                                                                                                       tcatcCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAg                             <  6:226981/149‑1 (MQ=255)                                                                                                                         atcCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGc                            <  3:263359/148‑1 (MQ=255)                                                                                                                                   tCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAg                 <  6:319131/149‑1 (MQ=255)                                                                                                                                   tCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAg                 <  4:195318/149‑1 (MQ=255)                                                                                                                                           gACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCt         >  4:110584/1‑149 (MQ=255)                                                                                                                                             ccccGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGTCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTgg       <  1:280139/149‑1 (MQ=255)                                                                                                                                             ccccGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTgg       <  8:20995/149‑1 (MQ=255)                                                                                                                                             ccccGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTgg       <  3:110584/149‑1 (MQ=255)                                                                                                                                              cccGACCAGCCGATGATCACCGGGCGCACTTACTGCGCTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCAGCAAGAGCCAGACCCACAACGGGGAAGGATTCAACGAGCTGCGTATCGAGGATGAGCTgcg      >  2:227635/1‑147 (MQ=21)                                                                                                                                                 gACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGc     >  1:141569/1‑147 (MQ=255)                                                                                                                                                  aCCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAag  <  4:253549/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CCCTGGGACCGCGAAAGCCAGAACAACGAGTTCAGTTCGTGCTGGCTGCGGGTGTCTCAAGGCTGGGCGGGGGGCAGCTGGGGCTCGATGGCCATCCCTCGGATCGGCCAGGACGTGATCATCCATTACGTCAACGGCGACCCCGACCAGCCGATGATCACCGGGCGCACTTACTGCGGTGACCAACTGCCGCCTTACGATCTGCCCGATCACAAAACACGCATGACCATCAAGAGCCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAG  >  NC_002947/4612363‑4612656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.