New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3364666 =	58 (1.110)	4 (0.080)	4/256	NT	6.7%	coding (560/879 nt)	PP_2961	LysR family transcriptional regulator
	?	NC_002947	3364702 =	55 (1.100)					coding (524/879 nt)	PP_2961	LysR family transcriptional regulator

TCGCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGTAATCGTTCAGGCG  >  NC_002947/3364555‑3364850                                                                                                                                                     |                                                                                                                                                      tCGCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATg                                                                                                                                                      >  3:259281/1‑149 (MQ=255) catcgacctggccatccgcattggtttggtgaagagcgagcggctggtggccgtgcccctgggcaccagcacacggcgagtctatgctgcaccggcctatctcgatcgccaTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATg                                                                                                                                                      >  1:245879‑M1/112‑149 (MQ=255)   tcgacctggccatccgcattggtttggtgaagagcgaggggctggtggccgtgcccctgggcaccagcacacggcgagtctatgctgcaccggcctatctcgatcgccaTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGc                                                                                                                                                    >  5:88859‑M1/110‑149 (MQ=255)   gCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGTCATgg                                                                                                                                                     <  3:87770/148‑1 (MQ=255)            gCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGa                                                                                                                                                  <  3:215861/142‑1 (MQ=255)            gCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGa                                                                                                                                                  >  4:215861/1‑142 (MQ=255)              tGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAg                                                                                                                                         <  8:257396/149‑1 (MQ=255)                   aCGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCgg                                                                                                                                    >  3:39995/1‑149 (MQ=255)                        gCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTgca                                                                                                                                <  2:118683/148‑1 (MQ=255)                         ccTTTGATTACAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCGCAAGCAAGGTGAAGGCGATGCAGTTGTGGGCTGCCTGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGTTTGGCCGGGgcag                                                                                                                               >  8:293964/1‑148 (MQ=255)                          cTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTgcagca                                                                                                                             >  3:17457/1‑149 (MQ=255)                             tGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCAt                                                                                                                            <  8:279575/147‑1 (MQ=255)                              gATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGa                                                                                                                         >  7:88044/1‑149 (MQ=255)                                ttGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACt                                                                                                                       >  8:4774/1‑149 (MQ=255)                                        tCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCgtgt                                                                                                               >  6:1582/1‑149 (MQ=255)                                        tCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCgtgt                                                                                                               >  5:70476/1‑149 (MQ=255)                                         cAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGtgtg                                                                                                              >  4:106998/1‑149 (MQ=255)                                          aaGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCgtgt                                                                                                               <  4:252829/147‑1 (MQ=255)                                            gTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTg                                                                                                           <  2:126179/149‑1 (MQ=255)                                             tggtggccgtgcccctgggcaccagcacacggcgagtctatgctgcaccggcctatctcgatcgccaTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATgg                                                                                                                                                     >  2:209469‑M1/68‑106 (MQ=255)                                             tggtggccgtgcccctgggcaccagcacacggcgagtctatgctgcaccggcctatctcgatcgccaTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATgg                                                                                                                                                     <  1:209469‑M1/39‑1 (MQ=255)                                               cTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGt                                                                                                         <  2:210147/148‑1 (MQ=255)                                                     cACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAgg                                                                                                 <  4:17457/149‑1 (MQ=255)                                                      aCGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAggg                                                                                                >  3:123930/1‑149 (MQ=255)                                                            ggTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCCGCCCGCCCGCCCGGC‑GCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACgg                                                                                          <  1:106166/149‑1 (MQ=255)                                                             gTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCAAGGGGCACGGc                                                                                         >  2:253499/1‑149 (MQ=255)                                                              tGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCgtt                                                                                                                                   <  7:239745/107‑3 (MQ=255)                                                              tGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCgat                                                                                                                                   >  8:239745/1‑105 (MQ=255)                                                              tGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGcc                                                                                        >  2:310576/1‑149 (MQ=255)                                                                  gTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGccacca                                                                                    <  7:4774/149‑1 (MQ=255)                                                                    gCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATa                                                                                                                           <  5:318862/109‑1 (MQ=255)                                                                    gCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATa                                                                                                                           >  6:318862/1‑109 (MQ=255)                                                                     ccAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGcc                                                                                 >  8:184175/1‑149 (MQ=255)                                                                     ccAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGcc                                                                                 >  2:217384/1‑149 (MQ=255)                                                                        gCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCt                                                                              <  8:29104/149‑1 (MQ=255)                                                                           gTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGc                                                                           <  8:88044/149‑1 (MQ=255)                                                                            tCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGct                                                                          >  8:138396/1‑149 (MQ=255)                                                                              gTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGctct                                                                        >  7:193537/1‑149 (MQ=255)                                                                               tAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCtt                                                                       <  7:184175/149‑1 (MQ=255)                                                                                   gCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCac                                                                    >  5:308126/1‑148 (MQ=255)                                                                                    cTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTCGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCac                                                                    <  1:217384/148‑1 (MQ=255)                                                                                    cTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCacc                                                                   >  8:126180/1‑148 (MQ=255)                                                                                       aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCaccaaac                                                               <  8:193537/149‑1 (MQ=255)                                                                                       aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCaccaaac                                                               >  1:52081/1‑149 (MQ=255)                                                                                       aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGAC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCa                                                                     >  4:307043/1‑143 (MQ=255)                                                                                       aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGAC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCa                                                                     <  3:307043/143‑1 (MQ=255)                                                                                         gcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCGTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCaccaaac                                                               >  1:67226/1‑148 (MQ=255)                                                                                            agGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATg                                                          <  7:126180/149‑1 (MQ=255)                                                                                                gAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCCCCAAACCAATGCGGa                                                      >  6:241983/1‑149 (MQ=255)                                                                                                 aaGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATg                                                          >  6:66734/1‑144 (MQ=255)                                                                                                 aaGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATg                                                          <  5:66734/144‑1 (MQ=255)                                                                                                   ggCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATgg                                                   >  1:326196/1‑149 (MQ=255)                                                                                                     cGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGc                                                  >  6:216921/1‑148 (MQ=255)                                                                                                            gTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGa                                          <  5:1582/149‑1 (MQ=255)                                                                                                             gccatggccagccacgcgagcccgccgaactggcaggccaTGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGa                                          >  5:88859‑M2/41‑149 (MQ=255)                                                                                                              ccatggccagccacgcgagcccgccgaactggcaggccaTGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGccacca                                                                                    <  1:209469‑M2/67‑1 (MQ=255)                                                                                                              ccatggccagccacgcgagcccgccgaactggcaggccaTGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGccacca                                                                                    >  2:209469‑M2/40‑106 (MQ=255)                                                                                                               catggccagccacgcgagcccgccgaactggcaggccaTGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCGCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATg                                        >  1:245879‑M2/39‑149 (MQ=255)                                                                                                                   CCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTc                                   >  3:106998‑M1/1‑149 (MQ=255)                                                                                                                    CTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTc                                   <  3:58678‑M1/148‑1 (MQ=255)                                                                                                                             cggcggGC‑TCGCGTGGCTGGCCATGGCGATCGAGATCGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAg                          <  8:235679/148‑1 (MQ=255)                                                                                                                             cggcggGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAg                          <  2:67226/148‑1 (MQ=255)                                                                                                                                 gggC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCtt                     <  7:302963/149‑1 (MQ=255)                                                                                                                                   gC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCg                   <  1:310576/149‑1 (MQ=255)                                                                                                                                    c‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGt                  >  2:111713/1‑149 (MQ=255)                                                                                                                                        gcgTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGTGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGtt                 <  4:259281/147‑1 (MQ=255)                                                                                                                                         cgTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGt               >  8:189052/1‑148 (MQ=255)                                                                                                                                             gctggcCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGTAATCg          >  7:272059/1‑149 (MQ=255)                                                                                                                                              ctggcCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGTAATCGt         <  6:70476/149‑1 (MQ=255)                                                                                                                                               tggcCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGTAATCGtt        >  6:12379/1‑149 (MQ=255)                                                                                                                                                 gccaTGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGTAATCGTTCa      <  6:308126‑M2/145‑1 (MQ=255)                                                                                                                                                 gccaTGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGTAATCGTTCa      <  1:111713‑M2/145‑1 (MQ=255)                                                                                                                                                     tGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGTAATCGTTCAGgcg  <  2:326196/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      TCGCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGC‑TCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGT‑GCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCATGAGCAGGTCTTCGTTGTAATCGTTCAGGCG  >  NC_002947/3364555‑3364850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.