New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3479286	55 (1.060)	4 (0.080)	4/252	NT	7.1%	coding (1933/2496 nt)	PP_3090	OmpA domain‑containing protein
	?	NC_002947	= 3479308	52 (1.050)					coding (1911/2496 nt)	PP_3090	OmpA domain‑containing protein

AGGAAGGCGTTGTCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTGGGCGCGGTTGTCATGGGGCA  >  NC_002947/3479162‑3479453                                                                                                                                                     |                                                                                                                                                  aGGAAGGCGTTGTCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGat                                                                                                                                                 >  5:115890‑M2/1‑147 (MQ=255)   gAAGGCGTTGGCGAGGATGCGCGGGACCTCTGGCTCACGGATCGGGGCGCTATAGCACGTGATCTGGCGGCTGGCATACAGGTCGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGatgg                                                                                                                                               >  3:215506‑M2/1‑145 (MQ=255)    aaGGCGTTGTCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGatggc                                                                                                                                              >  6:312678‑M2/1‑144 (MQ=255)         gTTGGCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGt                                                                                                                                         <  1:117996/149‑1 (MQ=255)            gTCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTAc                                                                                                                                       >  3:72736/1‑148 (MQ=255)            gTCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTAc                                                                                                                                       <  5:212772/148‑1 (MQ=255)            gTCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTAc                                                                                                                                       <  8:88558/148‑1 (MQ=255)            gTCGAGGAAGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTAc                                                                                                                                       <  5:191610/148‑1 (MQ=255)             tCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTAc                                                                                                                                       >  2:326404/1‑147 (MQ=255)               gAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCag                                                                                                                                    >  8:180882/1‑148 (MQ=255)                      cgcgGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCg                                                                                                                             <  5:140500/148‑1 (MQ=255)                      cgcgGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCg                                                                                                                             <  7:180882/148‑1 (MQ=255)                             cATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTg                                                                                                                      <  2:310466/148‑1 (MQ=255)                              aTCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTgcg                                                                                                                    >  2:202015/1‑149 (MQ=255)                               tCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTgcgc                                                                                                                   >  1:46237/1‑149 (MQ=255)                               tCTGGCTCACAGATCTAATCGCTATAAAACATGATCTAACGGCTGACATACAGGTAGTCCTAGTTGCCACCGGCCTCCCTGCCAGCGGCGGCCATGATCTTGACGGTATGGC‑‑GGGCGATGGCCGGGAACCAGTAGTCCGGCAGGTgcg                                                                                                                    >  8:48543/1‑148 (MQ=255)                                    cTCACGGATCTGGTCGCTATAGAACGTGTTCTGGCGGCTGTCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCTATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTga                                                                                                              <  7:48543/149‑1 (MQ=255)                                    cTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCtt                                                                                                                >  1:290680/1‑147 (MQ=255)                                    cTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCtt                                                                                                                <  2:290680/147‑1 (MQ=255)                                     tCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAg                                                                                                                         >  6:51605/1‑137 (MQ=255)                                       aCGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTgaga                                                                                                            >  6:31994/1‑148 (MQ=255)                                         ggATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCtt                                                                                                                <  2:314493/142‑1 (MQ=255)                                         ggATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCtt                                                                                                                >  1:314493/1‑142 (MQ=255)                                          gATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCtt                                                                                                                >  6:147303/1‑141 (MQ=255)                                          gATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCtt                                                                                                                <  5:147303/141‑1 (MQ=255)                                             cTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGatggccg                                                                                                                                            >  5:240146‑M2/1‑103 (MQ=255)                                             cTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGatggccg                                                                                                                                            <  6:240146‑M2/110‑8 (MQ=255)                                               ggTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCggg                                                                                                   >  3:121067/1‑149 (MQ=255)                                                gTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGt                                                                                                  >  4:261017/1‑149 (MQ=255)                                                    cTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCgg                                                                                               >  5:140654/1‑148 (MQ=255)                                                    cTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGc                                                                                              <  1:125476/149‑1 (MQ=255)                                                    cTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGGCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTGGAGAAACGCCGGGTCGGc                                                                                              <  7:4593/149‑1 (MQ=255)                                                     tataGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCa                                                                                             >  7:96727/1‑149 (MQ=255)                                                            cGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTcgc                                                                                      >  7:11440/1‑149 (MQ=255)                                                            cGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTcgc                                                                                      <  2:262602/149‑1 (MQ=255)                                                                          tGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGgaga                                                                         >  2:150563/1‑148 (MQ=255)                                                                            gCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAg                                                                      <  8:96727/149‑1 (MQ=255)                                                                                aCAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAg                                                                      <  8:211433/145‑1 (MQ=255)                                                                                aCAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAg                                                                      >  7:211433/1‑145 (MQ=255)                                                                                  aGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCAc                                                                <  8:11440/149‑1 (MQ=255)                                                                                  aGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCAc                                                                >  1:303733/1‑149 (MQ=255)                                                                                    gTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGCGAGGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCGTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCAc                                                                >  1:257123/1‑149 (MQ=255)                                                                                    gTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCAc                                                                <  1:144016/147‑1 (MQ=255)                                                                                    gTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCAc                                                                >  2:144016/1‑147 (MQ=255)                                                                                       gTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTaa                                                            <  3:261017/148‑1 (MQ=255)                                                                                       gTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAg                                                           >  2:233026/1‑149 (MQ=255)                                                                                          cTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAgtgt                                                        >  6:296366/1‑149 (MQ=255)                                                                                           tGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTc                                                       >  3:292799/1‑149 (MQ=255)                                                                                                    ccGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGgccgc                                              >  2:56035/1‑149 (MQ=255)                                                                                                         cTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTc                                         <  5:31994/149‑1 (MQ=255)                                                                                                            gCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTcc                                        <  6:140654/147‑1 (MQ=255)                                                                                                            gCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCg                                       <  4:121067/148‑1 (MQ=255)                                                                                                              tGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGatggccgccgctggcagcgaggccggtggcaaccaggactacctgtatgccagccgccagatcacgttctatagcgaccagatccgtgagccagatgtaccgcgcatcctc                                    <  6:108984‑M2/149‑112 (MQ=255)                                                                                                              tGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGaaa                                    >  6:133377/1‑149 (MQ=255)                                                                                                                   gcggcggcgATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGc                               <  8:290947/149‑1 (MQ=255)                                                                                                                   gcggcgGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGc                               <  4:72736/149‑1 (MQ=255)                                                                                                                      gcggcCATGCTCTTGCCGGTCTGGC‑‑GGGCGatggccgccgctggcagcgaggccggtggcaaccaggactacctgtatgccagccgccagatcacgttctatagcgaccagatccgtgagccagatgtaccgcgcatcct                                     >  3:51164‑M2/1‑30 (MQ=255)                                                                                                                      gcggcCATGCTCTTGCCGGTCTGGC‑‑GGGCGatggccgccgctggcagcgaggccggtggcaaccaggactacctgtatgccagccgccagatcacgttctatagcgaccagatccgtgagccagatgtaccgcgcatcct                                     <  4:51164‑M2/140‑111 (MQ=255)                                                                                                                            aTGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTg                      >  6:108107/1‑149 (MQ=255)                                                                                                                             tGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTgg                     <  1:202015/149‑1 (MQ=255)                                                                                                                             tGCTCTTGCCGGGCTGGC‑‑GGGCGATGGCGGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTgg                     <  2:257123/149‑1 (MQ=255)                                                                                                                                    gCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTGGgcgc                 <  2:303733/146‑1 (MQ=255)                                                                                                                                    gCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTGGGCGCgg               <  5:108107/148‑1 (MQ=255)                                                                                                                                     ccGGTCTGGC‑‑GGGCGatggccgccgctggcagcgaggccggtggcaaccaggactacctgtatgccagccgccagatcacgttctatagcgaccagatccgtgagccagatgtaccgcgcatcctcgacaacgccttcctgatgtcca              >  5:108984‑M2/1‑15 (MQ=255)                                                                                                                                     ccGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGACTTGAGAAACGCCGGGTCGGCATGCTCGCGCCGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTGGGCGCGGtt             >  8:161595/1‑149 (MQ=255)                                                                                                                                          cTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTGGGCGCGGTTGTCAt        >  5:310998/1‑149 (MQ=255)                                                                                                                                             gc‑‑gggcgATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTGGGCGCGGTGGTCATggg     >  4:240285/1‑149 (MQ=255)                                                                                                                                                  ggcgATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTGGGCGCGGTTGTCATGGGGCa  <  6:310998/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  AGGAAGGCGTTGTCGAGGATGCGCGGTACATCTGGCTCACGGATCTGGTCGCTATAGAACGTGATCTGGCGGCTGGCATACAGGTAGTCCTGGTTGCCACCGGCCTCGCTGCCAGCGGCGGCCATGCTCTTGCCGGTCTGGC‑‑GGGCGATGGCCGGGTACCAGTAGTCCGGCAGGTGCGCCTTGAGAAACGCCGGGTCGGCATGCTCGCGCTGGCCCGGAGAAAGCATCACGTAAGTGTCCAGGGCCGCCTTTCCGAAATTGGCGATCGACTGGGCGCGGTTGTCATGGGGCA  >  NC_002947/3479162‑3479453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.