New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 143910	48 (0.980)	4 (0.090)	4/252	NT	7.7%	coding (360/471 nt)	PP_0136	hypothetical protein
	?	NC_002947	= 143966	50 (1.060)					coding (416/471 nt)	PP_0136	hypothetical protein

TCTGCCGTTACTGAGGACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/143761‑143910 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTCGTCAGGTTCGCCCAGCCAGCGGTACTGCGCATGACGGGTGGGCGACTTGTCGCTCGGCAAACC  <  NC_002947/143966‑143902                                                                                                                                                                                                                         TCTGCCGTTACTGAGGACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCC                                                                    <  4:138980/149‑1                                         CGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGTCGTCAGGTTCGCCCAGCCAGCGGTACTGCGCATGACGG                            >  7:22725/1‑149                                                       CAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGTCGTCAGGTTCGCCCAGCCAGCGGTACTGCGCATGACGGGTGGGCGACTTGTC              >  3:88975/1‑149                                                               TTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGTCGTCAGGTTCGCCCAGCCAGCGGTACTGCGCATGACGGGTGGGCGACTTGTCGCTCGGCA      <  4:88975/149‑1                                                                   ACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGTCGTCAGGTTCGCCCAGCCAGCGGTACTGCGCATGACGGGTGGGCGACTTGTCGCTCGGCAAACC  <  8:22725/149‑1                                                                                                                                                                                                                         TCTGCCGTTACTGAGGACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/143761‑143910 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTCGTCAGGTTCGCCCAGCCAGCGGTACTGCGCATGACGGGTGGGCGACTTGTCGCTCGGCAAACC  <  NC_002947/143966‑143902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.