New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 143910	48 (0.980)	4 (0.090)	4/252	NT	7.7%	coding (360/471 nt)	PP_0136	hypothetical protein
	?	NC_002947	= 143966	50 (1.060)					coding (416/471 nt)	PP_0136	hypothetical protein

CGTTACTGAGGACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGCCGGTACGGATGAAAGGTCACTCACT  >  NC_002947/143766‑144057                                                                                                                                                 |                                                                                                                                                    cGTTACTGAGGACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGc                                                                                                                                                  >  1:123712/1‑148 (MQ=255)       tGAGGACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGt                                                                                                                                           >  2:284152/1‑149 (MQ=255)         aGGACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCg                                                                                                                                         >  2:139383/1‑149 (MQ=255)           gACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCTAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGcc                                                                                                                                       >  1:264143/1‑149 (MQ=255)                    aaGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCa                                                                                                                              >  4:139482/1‑149 (MQ=255)                        aCCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATgc                                                                                                                           <  3:260403/148‑1 (MQ=255)                                  cccGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCgct                                                                                                                <  7:278425/149‑1 (MQ=255)                                    cGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGtcgtcaggttcgcccagccagcggtactgcgcatgacgg                                                                                                              >  7:22725‑M1/1‑110 (MQ=255)                                        gtgCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGctggctgg                                                                                                          <  7:90326/149‑1 (MQ=255)                                            gAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGa                                                                                                      >  5:165296/1‑149 (MQ=255)                                                 aCAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCt                                                                                                  >  3:169400/1‑148 (MQ=255)                                                  cAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGtcgtcaggttcgcccagccagcggtactgcgcatgacgggtgggcgacttgtc                                                                                                >  3:88975‑M1/1‑96 (MQ=255)                                                  cAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTga                                                                                                <  6:236130/149‑1 (MQ=255)                                                   agaaCAATTGCACCTAAAAGCGGCTGATCGTGGCGTTCAGCTGTGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGATGGGCGAACCTgac                                                                                               >  6:192255/4‑149 (MQ=255)                                                          ttGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGtcgtcaggttcgcccagccagcggtactgcgcatgacgggtgggcgacttgtcgctcggca                                                                                        <  4:88975‑M1/149‑62 (MQ=255)                                                             cACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATg                                                                                      >  4:14496/1‑148 (MQ=255)                                                             cACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGAAGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATg                                                                                      >  1:217093/1‑148 (MQ=255)                                                              aCCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGtcgtcaggttcgcccagccagcggtactgcgcatgacgggtgggcgacttgtcgctcggcaaacc                                                                                    <  8:22725‑M1/149‑66 (MQ=255)                                                              aCCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAAc                                                                                                    <  6:25239/133‑1 (MQ=255)                                                              aCCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAAc                                                                                                    >  5:25239/1‑133 (MQ=255)                                                              aCCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATg                                                                                      >  7:79552/1‑147 (MQ=255)                                                              aCCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGaa                                                                                    <  3:139482/149‑1 (MQ=255)                                                               ccTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAg                                                                                   >  4:169391/1‑149 (MQ=255)                                                                cTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAgg                                                                                  <  1:139383/149‑1 (MQ=255)                                                                  aCAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAAc                                                                                                    >  1:282281/1‑129 (MQ=255)                                                                  aCAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAAc                                                                                                    <  2:282281/129‑1 (MQ=255)                                                                     aGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCCCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAAtg                                                                             <  2:264143/149‑1 (MQ=255)                                                                            gATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAg                                                                                   >  5:112765/1‑136 (MQ=255)                                                                            gATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAg                                                                                   <  6:112765/136‑1 (MQ=255)                                                                               cGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGag                                                                    <  6:165296/148‑1 (MQ=255)                                                                                gTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGagc                                                                   <  3:169391/148‑1 (MQ=255)                                                                                      ttCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGCCGACGGCATGAAGGCAAtgctg                                                                          >  4:243494/1‑135 (MQ=255)                                                                                        cAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAg                                                           <  3:14496/148‑1 (MQ=255)                                                                                         aGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCg                                                         >  6:258688/1‑149 (MQ=255)                                                                                                aCAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTTAAGCGTGAccc                                                   >  1:260427/1‑148 (MQ=255)                                                                                                 cAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCg                                                  >  5:235623/1‑148 (MQ=255)                                                                                                  aaGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGaa                                                >  2:308610/1‑149 (MQ=255)                                                                                                                 gggATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCAtt                                 >  6:311626/1‑149 (MQ=255)                                                                                                                      gCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGTTACt                                        <  3:141683/137‑1 (MQ=255)                                                                                                                      gCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACt                                        >  4:141683/1‑137 (MQ=255)                                                                                                                      gCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATttgtt                             <  2:217093/148‑1 (MQ=255)                                                                                                                       cTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGc                           >  7:134886/1‑149 (MQ=255)                                                                                                                        tcgtcgAGGTGCCCGATGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGcc                          >  6:11180/1‑149 (MQ=255)                                                                                                                        tcgtcgAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAAtgctgc                                                                         >  5:227289/1‑102 (MQ=255)                                                                                                                        tcgtcgAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAAtgctgc                                                                         <  6:227289/102‑1 (MQ=255)                                                                                                                        tcgtcgAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGcc                          >  8:85264/1‑149 (MQ=255)                                                                                                                        tcgtcgAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGcc                          <  5:311626/149‑1 (MQ=255)                                                                                                                          gtcgAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGCCg                         <  7:85264/148‑1 (MQ=255)                                                                                                                             gAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGCCGGTa                      <  2:260427/148‑1 (MQ=255)                                                                                                                                 tGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGCCGGTACGGAt                 <  8:79552/149‑1 (MQ=255)                                                                                                                                  gCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGATGCCGGTACGGAt                 >  7:221742/1‑148 (MQ=255)                                                                                                                                  gCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGATGCCGGTACGGAt                 <  8:221742/148‑1 (MQ=255)                                                                                                                                     cGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGCCGGTACGGATGa               >  5:154730/1‑147 (MQ=255)                                                                                                                                         ggTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGAcggcaaaccttcgggcacctcgacgagcatcccgtaggcatcatccttgtcccagctgaacgccacgatcagccgcttgtaggt         <  8:22725‑M2/149‑85 (MQ=255)                                                                                                                                             tGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGAcggcaaaccttcgggcacctcgacgagcatcccgtaggcatcatccttgtcccagctgaacgccacgatcagccgcttgtaggtgcaa     <  4:88975‑M2/149‑89 (MQ=255)                                                                                                                                                cGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGCCGGTACGGATGAAAGGTcactcact  >  7:191523/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                    CGTTACTGAGGACGGCGACAAGTACCTGGTCGGCCCGCTGTGCGAAAAACAGGACAATTGCACCTACAAGCGGCTGATCGTGGCGTTCAGCTGGGACAAGGATGATGCCTACGGGATGCTCGTCGAGGTGCCCGAAGGTTTGCCGAGCGACAAGTCGCCCACCCGTCATGCGCAGTACCGCTGGCTGGGCGAACCTGACGACGGCATGAAGGCAATGCTGCAGGAGCAGCTCAAGCGTGACCCGAACTGGTACTGAGCATTTGTTGCCGGTACGGATGAAAGGTCACTCACT  >  NC_002947/143766‑144057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.