| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 314661 = | 50 (1.020) | 4 (0.090) | 4/252 | NT | 8.5% | coding (57/567 nt) | nudE | ADP compounds hydrolase NudE |
| ? | NC_002947 | 314750 = | 38 (0.810) | coding (146/567 nt) | nudE | ADP compounds hydrolase NudE | |||||
CACCGCAGTATTCCTCCACCAGCACGGCGTGCTCGGCATCGAGCATGGCCACGATCATCACCGCGCCGTAGCCGTTACCCCGGCCCACCAGGCGCTCATAGGTGCGCTCGGCACCATTGCTGAAGCGCAGCTGTACGGCTTCGACGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/314809‑314661‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCGGCA > NC_002947/314750‑314877 CACCGCAGTATTCCTCCACCAGCACGGCGTGCTCGGCATCGAGCATGGCCACGATCATCACCGCGCCGTAGCCGTTACCCCGGCCCACCAGGCGCTCATAGGTGCGCTCGGCACCATTGCTGAAGCGCAGCTGTACGGCTTCGACGCG > 5:145460/1‑148CACCGCAGTATTCCTCCACCAGCACGGCGTGCTCGGCATCGAGCATCGCCACGATCATCACCGCGCCGTAGCCGTTACCTCGCCCCACCAGGCGCTCATACGTGCGCTCGGCACCAATCCAGAACCCCAGCTCTACGGCTTCGACGCG > 4:148645/1‑148 aCACAAGCACGGCGTGCTCGGCATCTACCATGGCCACGATCATCACAGCGCCGTAGCCGTTACCCCGGCCCACCAGGCGCACATACCTGCGCTCGGCACCATTGCTGAAGCGCACATGTACGGCTTCGACGCG > 4:261085/2‑133 CCACCAGCACGGCGTGCTCGGCATCGAGCATGGCCACGATCATCACCGCGCCGTAGCCGTTACCCCGGCCCACCAGGCGCTCATAGGTGCGCTCGGCACCATTGCTGAAGCGCAGCTGTACGGCTTCGACGCG < 3:261085/133‑1 ACGATCATCACCGCGCCGTAGCCGTTACCCCGGCCCACCAGGCGCTCATAGGTGCGCTCGGCACCATTGCTGAAGCGCAGCTGTACGGCTTCGACGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAA > 4:76770/1‑149 GATCATCACCGCGCCGTAGCCGTTACCCCGGCCCACCAGGCGCTCATAGGTGCGCTCGGCACCATTGATGAAGCGCAGCTGTACGGCTTCGACGCGGTGATGATCGTGGCCAAGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAAT > 6:25922/1‑148 CGCTCGGCACCATTGCTGAAGCGCAGCTGTACGGCTTCGACGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAG < 3:76770/149‑1 AGCTGTACGGCTTCGACGCGGTGATGATCGTGGCCAAGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCGGCA < 5:25922/149‑1 CACCGCAGTATTCCTCCACCAGCACGGCGTGCTCGGCATCGAGCATGGCCACGATCATCACCGCGCCGTAGCCGTTACCCCGGCCCACCAGGCGCTCATAGGTGCGCTCGGCACCATTGCTGAAGCGCAGCTGTACGGCTTCGACGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/314809‑314661‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGTGGCACCGATGAATACGAGCTGTCGTTGCCCAAGGGCCTGATCGAGCCGGGCGAAGACGTGCTGGCGGCA > NC_002947/314750‑314877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |