New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	314661 =	50 (1.020)	4 (0.090)	4/252	NT	8.5%	coding (57/567 nt)	nudE	ADP compounds hydrolase NudE
	?	NC_002947	314750 =	38 (0.810)					coding (146/567 nt)	nudE	ADP compounds hydrolase NudE

CCAGGGAAGAACAGGCATGGGAAACTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGT  >  NC_002947/314523‑314808                                                                                                                                           |                                                                                                                                                    ccAGGGAAGAACAGGCATGGGAAACTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGaa                                                                                                                                            <  4:107201/148‑1 (MQ=255) ccAGGGAAGAACAGGCATGGGAAACTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAg                                                                                                                                           <  5:112362/149‑1 (MQ=255)  cAGGGAAGAACAGGCATGGGAAACTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGc                                                                                                                                          <  5:152148/149‑1 (MQ=255)  cAGGGAAGAACAGGCATGGGAAACTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCAAGCCAAGGAGCCCCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCCAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGc                                                                                                                                          >  7:144798/1‑149 (MQ=255)    gggAAGAACAGGCATGGGAAACTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCg                                                                                                                                        <  2:39785/149‑1 (MQ=255)      gaagaaCAGGCATGGGAAACTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGACCCGCCCCATGCGCCAGAAACCCGCCGTACTCAGCCACGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTa                                                                                                                                      >  5:252427/1‑149 (MQ=255)           tgccgccagcacgtcttcgcccggctcgatcaggcccttgggcaacgacagctcgtattcatcggtgccaccgcagtattcctccaccagcacggcgtgctcggcatcgagcttggccacgatcatcaCCGCGTCGAAGCCGTACAGCt                                                                                                                                 <  5:25922‑M1/21‑1 (MQ=255)                       aaCTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCaa                                                                                                                     <  2:129682/149‑1 (MQ=255)                            tcGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTg                                                                                                                >  7:87718/1‑149 (MQ=255)                              gATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGcc                                                                                                              >  4:142070/1‑149 (MQ=255)                              gATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGcc                                                                                                              >  6:113551/1‑149 (MQ=255)                                 cAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCACAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGAAGCCGCCTGTTCCCCCTCGAAGCCGTACACCTGCGCTTCAGCAATGGTGCCGAg                                                                                                           >  1:205858/1‑149 (MQ=255)                                   gTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGCAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAgcg                                                                                                         <  2:247547/149‑1 (MQ=255)                                   ctcgatcaggcccttgggcaacgacagctcgtattcatcggtgccaccgcagtattcctccaccagcacggcgtgctcggcatcgagcatggccacgatcatcaCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAgcg                                                                                                         <  3:76770‑M1/45‑1 (MQ=255)                                       gCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTc                                                                                                                          >  1:107452/1‑128 (MQ=255)                                       gCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTc                                                                                                                          <  2:107452/128‑1 (MQ=255)                                         aaGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTa                                                                                                   >  4:290292/1‑149 (MQ=255)                                         aaGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTa                                                                                                   >  2:3709/1‑149 (MQ=255)                                           gCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTAt                                                                                                  >  6:94238/1‑148 (MQ=255)                                            cgctcttataGTTACCCGCTCACGCCAAGGAGCCTCCCCATGCGCCAGAAACCCACCCTACTCAGCCGCCAAATTGTCGGCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACATCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGa                                                                                                <  5:209117/143‑1 (MQ=255)                                            ccACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTAt                                                                                                  >  2:151054/1‑147 (MQ=255)                                              aCGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAgc                                                                                              <  3:142070/149‑1 (MQ=255)                                                ggTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAgcgc                                                                                            >  4:30461/1‑149 (MQ=255)                                                   ataGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAAATGTCGCCAGTACCCGCCTGTTCCGCCTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGACCGCACCTATGAgagatcg                                                                                         >  6:209117/1‑143 (MQ=255)                                                         aCCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGc                                                                                   >  6:145460/1‑149 (MQ=255)                                                           ccGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCg                                                                                 <  3:30461/149‑1 (MQ=255)                                                             gTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCggg                                                                               <  5:94238/149‑1 (MQ=255)                                                             gTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCggg                                                                               <  7:244055/149‑1 (MQ=255)                                                                  cGCCTAGGAGCCGCCCCATGCGCCAGAATCCCACCGTACTCAGCCTCGAAATTGGCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAAc                                                                          <  2:205858/149‑1 (MQ=255)                                                                   gCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACg                                                                         >  1:163405/1‑149 (MQ=255)                                                                     cAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGc                                                                       >  6:210913/1‑149 (MQ=255)                                                                         gAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACg                                                                   >  5:121985/1‑149 (MQ=255)                                                                           gccgccCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGgc                                                                 <  8:87718/149‑1 (MQ=255)                                                                              gccCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGcgcg                                                              <  7:251906/149‑1 (MQ=255)                                                                              gccCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGcgcg                                                              >  1:89804/1‑149 (MQ=255)                                                                                cccATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGAGGTAACGGCTACGGCGCGGt                                                            >  3:148645/1‑149 (MQ=255)                                                                                 ccATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCATGGTGGGCCGGGGTAACGGCTACGGCGCGGt                                                            >  7:136812/1‑148 (MQ=255)                                                                                       gcCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATc                                                     >  4:151665/1‑149 (MQ=255)                                                                                        attcctccaccagcacggcgtgctcggcatcgagcttggccacgatcatcaCCGCGTCGAAGCCGTACAGCTGCGCTTCATCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATc                                                     >  6:25922‑M1/52‑148 (MQ=255)                                                                                         ttcctccaccagcacggcgtgctcggcatcgagcatggccacgatcatcaCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGt                                                   >  4:76770‑M1/51‑149 (MQ=255)                                                                                         cAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCa                                                                                                       >  2:168480/1‑97 (MQ=255)                                                                                              aCCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCa                                              >  4:191936/1‑149 (MQ=255)                                                                                                ccACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCa                                              >  8:292306/1‑147 (MQ=255)                                                                                                ccACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCa                                              <  7:292306/147‑1 (MQ=255)                                                                                                     gTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGa                                       <  2:163405/149‑1 (MQ=255)                                                                                                            gCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAg                                <  5:210913/149‑1 (MQ=255)                                                                                                              cgcgAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCa                              >  3:124057/1‑149 (MQ=255)                                                                                                              cgcgAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCa                              >  1:115869/1‑149 (MQ=255)                                                                                                                         cGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCtgg                   <  7:134304/149‑1 (MQ=255)                                                                                                                             aGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTgga               <  6:252427/149‑1 (MQ=255)                                                                                                                              gTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTggag              <  3:290292/149‑1 (MQ=255)                                                                                                                              gTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTggag              <  4:124057/149‑1 (MQ=255)                                                                                                                                 gccgccTGTTCCGCGTCGAAGCCCTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTCGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGaa           >  3:292948/1‑149 (MQ=255)                                                                                                                                    gccTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATAc        >  7:62737/1‑149 (MQ=255)                                                                                                                                          tCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGt  >  1:301352/1‑149 (MQ=255)                                                                                                                                           |                                                                                                                                                    CCAGGGAAGAACAGGCATGGGAAACTCTCGATCAGTCGGCAAGCCACGGTATAGTAACCCGTTCACGCCAAGGAGCCGCCCCATGCGCCAGAAACCCACCGTACTCAGCCGCGAAATTGTCGCCAGTAGCCGCCTGTTCCGCGTCGAAGCCGTACAGCTGCGCTTCAGCAATGGTGCCGAGCGCACCTATGAGCGCCTGGTGGGCCGGGGTAACGGCTACGGCGCGGTGATGATCGTGGCCATGCTCGATGCCGAGCACGCCGTGCTGGTGGAGGAATACTGCGGT  >  NC_002947/314523‑314808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.