| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 335567 = | 28 (0.570) | 3 (0.060) | 3/250 | NT | 8.7% | intergenic (‑172/+32) | PP_0277/PP_5437 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 335591 = | 36 (0.770) | intergenic (‑196/+8) | PP_0277/PP_5437 | hypothetical protein/hypothetical protein | |||||
TATCCGTGAGCCACTTCCCCGACAACAGCGTTACTTCGGCGGCGCGCGTAGGATACTTCCGAAGCATCCAAACCCTGAAGCTTTTGACCCCATGGTTCAGAATTCCCTTACACAGATAACCCGGCTTACCCGCCCCCGTGTAGGAGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/335717‑335567‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAGTAACGCTGTTGTCGGGGAAGTGGCTCACGGATACCGTTTTCGGGTCGCTCTGG > NC_002947/335591‑335737 TATCCGTGAGCCACTTCCCCGACAACAGCGTTACTTCGGCGGCGCGCGTAGGATACTTCCGAAGCATCCAAACCCTGAAGCTTTTGACCCCATGGTTCAGAATTCCCTTACACAGATAACCCGGCTTACCCGCCCCCGTGTAGGAGCGG < 4:254637/149‑1 CCGACAACAGCGTTACTTCGGCGGCGCGCGTAGGATACTTCCGAAGCATCCAAACCCTGAAGCTTTTGACCCCATGGTTCAGAATTCCCTTACACAGATAACCCGGCTTACCCGCTCCTACACGGGGGCGGGTAAGCCGGGTTATCTGT < 8:177850/149‑1 TTCCGAAGCATCCAAACCCTGAAGCTTTTGACCCCATGGTTCAGAATTCCCTTACACAGATAACCCGGCTTACCCGCTCCTACACGGGGGCGGGTAAGCCGGGTTATCTGTG > 1:124019/1‑112 TTCCGAAGCATCCAAACCCTGAAGCTTTTGACCCCATGGTTCAGAATTCCCTTACACAGATAACCCGGCTTACCCGCTCCTACACGGGGGCGGGTAAGCCGGGTTATCTGTG < 2:124019/112‑1 TAGGAGCGGGTAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAGTAACGCTGTTGTCGGGGAAGTGGCTCACGGATACCGTTTTCag < 7:177850/148‑3 GCGGGTAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAG < 5:249356/100‑1 GCGGGTAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAG > 6:249356/1‑100 GGGTAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAGTAACGCTGTTGTCGGG < 7:127444/114‑1 GGGTAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAGTAACGCTGTTGTCGGG > 8:127444/1‑114 GTAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAGTAACGCTGTTGTCGGGGAAGTGGCTCACGGATACCGTTTTCGGGTCGCTCTGG > 5:287224/1‑149 GTAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAGTAACGCTGTTGTCGGGGAAGTGGCTCACGGATACCGTTTTCGGGTCGCTCTGG < 8:96009/149‑1 TATCCGTGAGCCACTTCCCCGACAACAGCGTTACTTCGGCGGCGCGCGTAGGATACTTCCGAAGCATCCAAACCCTGAAGCTTTTGACCCCATGGTTCAGAATTCCCTTACACAGATAACCCGGCTTACCCGCCCCCGTGTAGGAGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/335717‑335567‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtAAGCCGGGTTATCTGTGTAAGGGAATTCTGAACCATGGGGTCAAAAGCTTCAGGGTTTGGATGCTTCGGAAGTATCCTACGCGCGCCGCCGAAGTAACGCTGTTGTCGGGGAAGTGGCTCACGGATACCGTTTTCGGGTCGCTCTGG > NC_002947/335591‑335737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |