| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 710462 = | 39 (0.800) | 6 (0.130) | 5/252 | NT | 13.6% | coding (260/2832 nt) | ileS | isoleucine‑‑tRNA ligase |
| ? | NC_002947 | 710511 = | 39 (0.830) | coding (309/2832 nt) | ileS | isoleucine‑‑tRNA ligase | |||||
ACTCGGTCTTCTGCCCTTCGATCTGCTCGGCAGCGTACTCGCGGCACAGCTCGCGGGTACGGTCGGCGGAGAGGTGCTTGCCGTGGGTAACCTCGACCTTGTGCTCGATCGGCAGGCCGTGGCAGTCCCAACCTGGCACGTACGGCGCATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/710614‑710462‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgaGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGGCAGAAGACCGAGTTCATCCGCCTGGGCGTGCTGGGTGACTGGGACAACCCATAC > NC_002947/710511‑710655 ACTCGGTCTTCTGCCCTTCGATCTGCTCGGCAGCGTACTCGCGGCACAGCTCGCGGGTACGGTCGGCGGAGAGGTGCTTGCCGTGGGTAACCTCGACCTTGTGCTCGATCGGCAGGCCGTGGCAGTCCCAACCTGGCACGTACGGCGCA < 3:150192/149‑1 GGTCTTCTGCCCTTCGATCTGCTCGGCAGCGTACTCGCGGCACAGCTCGCGGGTACGGTCGGCGGAGAGGTGCTTGCCGTGGGTAACCTCGACCTTGTGCTCGATCGGCAGGCCGTGGCAGTCCCAACCTGGCACGTACGGCGCATCG < 5:270335/148‑1 ACCTTGTGCTCGATCGGCAGGCCGTGGCAGTCCCAACCTGGCACGTACGGCGCATCGAGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGG > 8:102400/1‑149 CTTGTGCTCGATCGGCAGGCCGTGGCAGTCCCAACCTGGCACGTACGGCGCATCGAGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGG > 2:283660/1‑147 TTGTGCTCGATCGGCAGGCCGTGGCAGTCCCAACCTGGCACGTACGGCGCATCGAGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGG > 2:23758/1‑146 TCGGCAGGCCGTGGCAGTCCCAACCTGGCACGTACGGCGCATCGAGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGGCAGAAGACCGAGT < 1:283660/149‑1 CCGTGGCAGTCCCAACCTGGCACGGCCTGCCGATCGAGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGGCAGAAGACCGAGTTCATCCGC > 7:221671/1‑149 CACGTACGGCGCATCGAGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGGCAGAAGACCGAGTTCATCCGCCTGGGCGTGCTGGGTGACTG < 7:102400/149‑1 CGAGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGGCAGAAGACCGAGTTCATCCGCCTGGGCGTGCTGGGTGACTGGGACAACCCATAC > 3:51067/1‑148 ACTCGGTCTTCTGCCCTTCGATCTGCTCGGCAGCGTACTCGCGGCACAGCTCGCGGGTACGGTCGGCGGAGAGGTGCTTGCCGTGGGTAACCTCGACCTTGTGCTCGATCGGCAGGCCGTGGCAGTCCCAACCTGGCACGTACGGCGCATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/710614‑710462‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgaGCACAAGGTCGAGGTTACCCACGGCAAGCACCTCTCCGCCGACCGTACCCGCGAGCTGTGCCGCGAGTACGCTGCCGAGCAGATCGAAGGGCAGAAGACCGAGTTCATCCGCCTGGGCGTGCTGGGTGACTGGGACAACCCATAC > NC_002947/710511‑710655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |