| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 722076 = | 46 (0.940) | 4 (0.090) | 4/250 | NT | 9.4% | coding (674/753 nt) | PP_0616 | ABC transporter ATP‑binding protein |
| ? | NC_002947 | 722166 = | 33 (0.710) | coding (584/753 nt) | PP_0616 | ABC transporter ATP‑binding protein | |||||
CGAACCCACTTCGGGCATGGGCATCGACGACATCCCGGTGATGACCGACCTGATCAGCGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/722228‑722076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccaAGGTCGCTGATCAGGTCGGTCATCACCGGGATGTCGTCGATGCCCATGCCCGAAGTGGGTTCGTCAAGCATCAGCAGGGTGGGCTTGGCACAGATCGACATGCCCACTTCCAGCACCCTTTGCTGGCCGTGCGACAGTTCGCCCGC > NC_002947/722166‑722311 CGAACCCACTTCGGGCATGGGCATCGACGACATCCCGGTGATGACCGACCTGATCAGAGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACG > 7:60001/1‑149 CCCACTTCGGGCATGGGCATCGACGACATCCCGGTGATGACCGACCTGATCAGCGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGC > 6:139497/1‑147 CACTTCGGGCATGGGCATCGACGACATCCCGGTGATGACCGACCTGATCAGCGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGC > 1:295331/1‑145 GCGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGCC < 7:199824/96‑1 GCGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGCC > 8:199824/1‑96 CGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGCCAAGGTCGCTGATCAGGTCGGTCATCACCGGGATGTCGTCGATGCCC < 5:282137/141‑1 CGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGCCAAGGTCGCTGATCAGGTCGGTCATCACCGGGATGTCGTCGATGCCC > 6:282137/1‑141 CTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGCCAAGGTCGCTGATCAGGTCGGTCATCACCGGGATGTCGTCGATGCCCATGCCCGAAGTG > 2:50822/1‑149 GCGCATCACGGTGATGAGTCACGGCCAAGGTCGCTGATCAGGTCGGTCATCACCGGGATGTCGTCGATGCCCATGCCCGAAGTGGGTTCGTCAAGCATCAGCAGGGTGGGCTTGGCACAGATCGACATGCCCACTTCCAGCACCCTTTG < 1:50822/149‑1 CCAAGGTCGCTGATCAGGTCGGTCATCACCGGGATGTCGTCGATGCCCATGCCCGAAGTGGGTTCGTCAAGCATCAGCAGGGTGGGCTTGGCACAGATCGACATGCCCACTTCCAGCACCCTTTGCTGGCCGTGCGACAGTTCGCCCGC < 3:75082/149‑1 CAAGGTCGCTGATCAGGTCGGTCATCACCGGGATGTCGTCGATGCCCATGCCCGAAGTGGGTTCGTCAAGCATCAGCAGGGTGGGCTTGGCACAGATCGACATGCCCACTTCCAGCACCCTTTGCTGGCCGTGCGACAGTTCGCCCGC > 8:179705/1‑148 CGAACCCACTTCGGGCATGGGCATCGACGACATCCCGGTGATGACCGACCTGATCAGCGACCTTGGCCGCGACCATACCGTGCTACTGATCGAGCACAACATGAGCATTGTCATGTCGATCAGCCAGCGCATCACGGTGATGAGTCACGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/722228‑722076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccaAGGTCGCTGATCAGGTCGGTCATCACCGGGATGTCGTCGATGCCCATGCCCGAAGTGGGTTCGTCAAGCATCAGCAGGGTGGGCTTGGCACAGATCGACATGCCCACTTCCAGCACCCTTTGCTGGCCGTGCGACAGTTCGCCCGC > NC_002947/722166‑722311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |