New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 806097 | 45 (0.920) | 3 (0.060) | 3/252 | NT | 6.6% | coding (1233/2832 nt) | PP_0693 | hypothetical protein |
? | NC_002947 | = 806113 | 42 (0.890) | coding (1217/2832 nt) | PP_0693 | hypothetical protein |
TTCCAGCGATTTTACCCACAGGTCGCTGTCGTCCAGCTCGATACCGCGATCTCCCAGCGGCAGGCTGAACAGCGCGCCGTTGAACAGACGCATCAGGCGGTCGACGTCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/805986‑806097 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcGCGAAGAGTTCTCGCAGCAGGACG < NC_002947/806113‑806090 TTCCAGCGATTTTACCCACAGGTCGCTGTCGTCCAGCTCGATACCGCGATCTCCCAGCGGCAGGCTGAACAGCGCGCCGTTGAACAGACGCATCAGGCGGTCGACGTC < 1:53522/108‑1 TTCCAGCGATTTTACCCACAGGTCGCTGTCGTCCAGCTCGATACCGCGATCTCCCAGCGGCAGGCTGAACAGCGCGCCGTTGAACAGACGCATCAGGCGGTCGACGTC > 2:53522/1‑108 CTGTCGTCCAGCTCGATACCGCGATCTCCCAGCGGCAGGCTGAACAGCGCGCCGTTGAACAGACGCATCAGGCGGTCGACGTCCTGCGCGAAGAGTTCTCGCAGCAGGA < 7:142601/109‑1 CTGTCGTCCAGCTCGATACCGCGATCTCCCAGCGGCAGGCTGAACAGCGCGCCGTTGAACAGACGCATCAGGCGGTCGACGTCCTGCGCGAAGAGTTCTCGCAGCAGGA > 8:142601/1‑109 CGCGATCTCCCAGCGGCAGGCTGAACAGCGCGCCGTCGAACAGACGCATCAGGCGGTCGACGTCCTGCGCGAAGAGTTCTCGCAGCAGGACG < 6:217470/92‑1 TTCCAGCGATTTTACCCACAGGTCGCTGTCGTCCAGCTCGATACCGCGATCTCCCAGCGGCAGGCTGAACAGCGCGCCGTTGAACAGACGCATCAGGCGGTCGACGTCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/805986‑806097 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcGCGAAGAGTTCTCGCAGCAGGACG < NC_002947/806113‑806090 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |