| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 872990 | 53 (1.080) | 3 (0.060) | 3/248 | NT | 5.9% | coding (172/1272 nt) | PP_0756 | hypothetical protein |
| ? | NC_002947 | = 873014 | 46 (0.990) | coding (148/1272 nt) | PP_0756 | hypothetical protein | |||||
GACTTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/872838‑872990‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgagGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGACCCGGCATTCCTCGATATCCTCACCCACTTCCGCTTTCCACGGGCGGCCGGCGCTCTCGGCTGGTTGCTCAAGCCCTTGATCGCACGCCGCCTGCGCAAGGAATTCGCCGGTGT < NC_002947/873014‑872869 GACTTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCACCCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGC > 6:96178/1‑149GACTTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGC > 1:306753/1‑149 TTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTAGCTGA > 8:227267/1‑149 GTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAG > 6:176593/1‑147 ATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGACCCG < 2:306753/148‑1 GGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGA < 5:138297/129‑1 GGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGA > 6:138297/1‑129 CGCTGAGGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGACCCGGCATTCCCCGATATCCTCACCCACTTCCGCTTTCCACGGGCGGCCGGCGCTTTCGGCTGGTTGCTCAAGCCCTTGATCGCACGCCGCCTGCGCAAGGAATTCGCCG < 7:163574/149‑1 GAGGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGACCCGGCATTCCTCGATATCCTCACCCACTTCCGCTTTCCACGGGCGGCCGGCGCTCTCGGCTGGTTGCTCAAGCCCTTGATCGCACGCCGCCTG < 1:5322/129‑1 GAGGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGACCCGGCATTCCTCGATATCCTCACCCACTTCCGCTTTCCACGGGCGGCCGGCGCTCTCGGCTGGTTGCTCAAGCCCTTGATCGCACGCCGCCTG > 2:5322/1‑129 AGGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGACCCGGCATTCCTCGATATCCTCACCCACTTCCGCTTTCCACGGGCGGCCGGCGCTCTCGGCTGGTTGCTCAAGCCCTTGATCGCACGCCGCCTGCGCAAGGAATTCGCCGGTGT < 1:297530/148‑1 GACTTTGTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/872838‑872990‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgagGTCCCTGCCGTTCTGGCACGCCTGCTCAGCGACCCGGCATTCCTCGATATCCTCACCCACTTCCGCTTTCCACGGGCGGCCGGCGCTCTCGGCTGGTTGCTCAAGCCCTTGATCGCACGCCGCCTGCGCAAGGAATTCGCCGGTGT < NC_002947/873014‑872869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |