New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 87299053 (1.080)3 (0.060) 3/248 NT 5.9% coding (172/1272 nt) PP_0756 hypothetical protein
?NC_002947 = 873014 46 (0.990)coding (148/1272 nt) PP_0756 hypothetical protein

GTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTCGGACGCACACAGACCCT  >  NC_002947/872844‑873135
                                                                                                                                                   |                                                                                                                                                  
gTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCa                                                                                                                                                  >  4:223280/1‑149 (MQ=255)
gTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAG                                                                                                                                                    >  6:176593‑M1/1‑147 (MQ=255)
 tCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCa                                                                                                                                                  <  7:227267/148‑1 (MQ=255)
 tCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAg                                                                                                                                                 >  6:199572/1‑149 (MQ=255)
  ccTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAgg                                                                                                                                                >  4:199658/1‑149 (MQ=255)
   cTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGTAGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAg                                                                                                                                                 <  1:245809/148‑1 (MQ=255)
      cAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTg                                                                                                                                            >  7:186390/1‑149 (MQ=255)
       aaGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGc                                                                                                                                           <  5:40642/149‑1 (MQ=255)
               gaCACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCACCCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGATTGCCGGGTCGCTGAGCAGGCGTGCCGGAGCgg                                                                                                                                   >  8:243359/1‑149 (MQ=255)
               gaCACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACgg                                                                                                                                   <  3:292569/149‑1 (MQ=255)
               gaCACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACgg                                                                                                                                   >  8:114042/1‑149 (MQ=255)
                 cacaGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATTCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCa                                                                                                                                 <  1:192700/149‑1 (MQ=255)
                  acaGGTAACACCGGCGAATTACTTGCGCAGGCGCAGTGCGATCAAGTGCATGAGAAACAAGCCGAGAGCGACGGCCCCCCGAGGAAAGCGGAAGTGGCTGAGGATATCGAGGAATGCCGGGTCCCAGATCAGGCCTGCCAGAACGGCAg                                                                                                                                >  7:166857/1‑149 (MQ=255)
                     ggTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCAGAGAGAGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATCCAGGCTCGCTGAGCAGGCGTGCCAGAACGGCAGGGa                                                                                                                             >  1:144932/1‑149 (MQ=255)
                      gTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGAc                                                                                                                            <  5:173432/149‑1 (MQ=255)
                      gTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGAc                                                                                                                            >  2:89498/1‑149 (MQ=255)
                         acacCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACct                                                                                                                          <  1:297530‑M2/148‑3 (MQ=255)
                             cGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAAAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGGGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACctcagcg                                                                                                                     <  7:163574‑M2/149‑8 (MQ=255)
                                cGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGcgtcg                                                                                                                  <  1:69072/149‑1 (MQ=255)
                                  aaTTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGcgtcgtc                                                                                                                <  5:176593/149‑1 (MQ=255)
                                  aaTTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAAAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGcgtcgtc                                                                                                                <  8:163574/149‑1 (MQ=255)
                                   aTTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGgtccctgccgttctggcacgcctgctcagcgacccg                                                                                                                <  2:306753‑M1/148‑37 (MQ=255)
                                          gcgcAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGt                                                                                                         <  2:223599/148‑1 (MQ=255)
                                            gcAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGcgt                                                                                                                    <  2:211745/135‑1 (MQ=255)
                                            gcAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGcgt                                                                                                                    >  1:211745/1‑135 (MQ=255)
                                             cAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACctc                                                                                                                         <  1:5322‑M2/129‑4 (MQ=255)
                                             cAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACctc                                                                                                                         >  2:5322‑M2/1‑126 (MQ=255)
                                             cAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGa                                                                                                     <  3:32685/149‑1 (MQ=255)
                                              aGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGAt                                                                                                    <  3:113575/149‑1 (MQ=255)
                                                 cggcgTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGc                                                                                                 <  5:127324/149‑1 (MQ=255)
                                                  ggcgTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGgtccctgccgttctggcacgcctgctcagcga                                                                                                                    >  6:138297‑M1/1‑97 (MQ=255)
                                                  ggcgTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGgtccctgccgttctggcacgcctgctcagcga                                                                                                                    <  5:138297‑M1/129‑33 (MQ=255)
                                                       gCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGaa                                                                                           >  3:92411/1‑149 (MQ=255)
                                                              aGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGccc                                                                                    >  1:88794/1‑149 (MQ=255)
                                                              aGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGcc                                                                                     >  2:232261/1‑148 (MQ=255)
                                                                       gCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGctc                                                                           <  5:199572/149‑1 (MQ=255)
                                                                          cacAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGTCATc                                                                                              <  2:33739/125‑1 (MQ=255)
                                                                          aCCAGCCGAGAGCGCCGGACGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATc                                                                                              >  1:33739/1‑127 (MQ=255)
                                                                           ccAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCtt                                                                       >  2:63779/1‑149 (MQ=255)
                                                                              gCCGAGAGCGCCGGCCGCCCGTGGAAATCGGAAGTGTGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCttgtt                                                                    <  8:166857/149‑1 (MQ=255)
                                                                              gCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGTGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCttgtt                                                                    <  2:297530/149‑1 (MQ=255)
                                                                              gCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCttgtt                                                                    <  7:114042/149‑1 (MQ=255)
                                                                                 gagaGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGa                                                                 <  5:96178/149‑1 (MQ=255)
                                                                                  agagCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGa                                                                 >  3:154469/1‑148 (MQ=255)
                                                                                   gagCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGaaa                                                               <  8:186390/149‑1 (MQ=255)
                                                                                    agCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTgg                                                                  >  3:262390/1‑145 (MQ=255)
                                                                                    agCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTgg                                                                  <  4:262390/145‑1 (MQ=255)
                                                                                       cgcCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGCCCTCAGCGACGTCGTACGGTCGGATGGCATCGAATTCGCCCATCCTGCTCTCTTGTTGGCAACgg                                                            >  4:207461/1‑149 (MQ=255)
                                                                                         cggtccgccCGTGGAAAGCTGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCTGGCGTGCAAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGTCATCGAATTCTCCCATGATGCTCTCTTGTTGGAAACGGCt                                                          <  2:144932/145‑1 (MQ=255)
                                                                                            gccgccCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAgg                                                       <  3:223280/149‑1 (MQ=255)
                                                                                             ccgccCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAggg                                                      >  7:27068/1‑149 (MQ=255)
                                                                                             ccgccCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAggg                                                      <  3:199658/149‑1 (MQ=255)
                                                                                              cgccCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGt                                                     <  4:92411/149‑1 (MQ=255)
                                                                                                      gAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAg                                                        >  7:226502/1‑138 (MQ=255)
                                                                                                      gAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAg                                                        <  8:226502/138‑1 (MQ=255)
                                                                                                        aaGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAg                                          <  1:232261/149‑1 (MQ=255)
                                                                                                            ggAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGAc                                      >  1:17137/1‑149 (MQ=255)
                                                                                                                       aGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGaaa                           <  2:17137/149‑1 (MQ=255)
                                                                                                                               gAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTc                   >  6:69542/1‑149 (MQ=255)
                                                                                                                               gAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTc                   >  5:189703/1‑149 (MQ=255)
                                                                                                                               gAGGAATGCCGGGTCGCTGAGCAGGCGTGCAAGAACGGCAGGGACCTGAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGGTCGAGACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTc                   >  8:214992/1‑149 (MQ=255)
                                                                                                                                aGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTCg                  <  4:154469/149‑1 (MQ=255)
                                                                                                                                       ccGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGTAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTCGGACGcac           >  1:253960/1‑149 (MQ=255)
                                                                                                                                       ccGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCATCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTCGGACGca            >  3:208317/1‑148 (MQ=255)
                                                                                                                                        cGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACctcagcgacccggcattcctcgatatcctcacccacttccgctttccacgggcggccggcgctctcggctggttgctcaagcccttgatcgcacgccgcctgcgcaaggaat            <  2:306753‑M2/148‑113 (MQ=255)
                                                                                                                                            tCGCTGAGCAGGCGTGCCAGAACGGCAGGGACctcagcgacccggcattcctcgatatcctcacccacttccgctttccacgggcggccggcgctctcggctggttgctcaagcccttgatcgcacgcc                           >  6:138297‑M2/1‑32 (MQ=255)
                                                                                                                                            tCGCTGAGCAGGCGTGCCAGAACGGCAGGGACctcagcgacccggcattcctcgatatcctcacccacttccgctttccacgggcggccggcgctctcggctggttgctcaagcccttgatcgcacgcc                           <  5:138297‑M2/129‑98 (MQ=255)
                                                                                                                                             cGCTGAGgtccctgccgttctggcacgcctgctcagcgacccggcattccccgatatcctcacccacttccgctttccacgggcggccggcgctttcggctggttgctcaagcccttgatcgcacgccgcctgcgcaaggaattcgccg      <  7:163574‑M1/149‑143 (MQ=255)
                                                                                                                                              gCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTc                   <  2:230195/134‑1 (MQ=255)
                                                                                                                                              gCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTc                   >  1:230195/1‑134 (MQ=255)
                                                                                                                                               cTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATTAAGGTAGGGACGGGCTCCGAAAAACGGCTCGGACGCACACAGAcc    <  1:63779/149‑1 (MQ=255)
                                                                                                                                                tGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAggg                                        <  5:287553/111‑1 (MQ=255)
                                                                                                                                                tGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAggg                                        >  6:287553/1‑111 (MQ=255)
                                                                                                                                                tGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTCGGACGCACACAGACCCt  >  3:160601/1‑149 (MQ=255)
                                                                                                                                                 gAGgtccctgccgttctggcacgcctgctcagcgacccggcattcctcgatatcctcacccacttccgctttccacgggcggccggcgctctcggctggttgctcaagcccttgatcgcacgccgcctg                      <  1:5322‑M1/129‑127 (MQ=255)
                                                                                                                                                 gAGgtccctgccgttctggcacgcctgctcagcgacccggcattcctcgatatcctcacccacttccgctttccacgggcggccggcgctctcggctggttgctcaagcccttgatcgcacgccgcctg                      >  2:5322‑M1/1‑3 (MQ=255)
                                                                                                                                                  aGgtccctgccgttctggcacgcctgctcagcgacccggcattcctcgatatcctcacccacttccgctttccacgggcggccggcgctctcggctggttgctcaagcccttgatcgcacgccgcctgcgcaaggaattcgccggtgt  <  1:297530‑M1/148‑147 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GTCCTGCAAGGTCGAGACACAGGTAACACCGGCGAATTCCTTGCGCAGGCGGCGTGCGATCAAGGGCTTGAGCAACCAGCCGAGAGCGCCGGCCGCCCGTGGAAAGCGGAAGTGGGTGAGGATATCGAGGAATGCCGGGTCGCTGAGCAGGCGTGCCAGAACGGCAGGGACCTCAGCGTCGTCGTACGGTCGGATGGCATCGAATTCGCCCATCATGCTCTCTTGTTGGAAACGGCTAGGGTAATAAGGTAGGGACGGGCTCCGAAAAACGGCTCGGACGCACACAGACCCT  >  NC_002947/872844‑873135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.