| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 896940 | 39 (0.800) | 4 (0.090) | 4/248 | NT | 9.7% | coding (372/1341 nt) | PP_0779 | methyl‑accepting chemotaxis transducer/sensory box protein |
| ? | NC_002947 | = 896963 | 38 (0.820) | coding (395/1341 nt) | PP_0779 | methyl‑accepting chemotaxis transducer/sensory box protein | |||||
GGACATCGTCCCCGCCCACGTAAAGTCGCTGGACTTCTACCAGCGCATGAAAAGTGCGATCAGCCGTGGTGAACACCTGAACGGTGCGTTCCGTCTTCTGCGGGGCAATGGTCAGGAAGCCTGGCTGCGCTCGATCCTGCAGCCGGTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/896790‑896940‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgaagTACTTGATGCGCCCCTCGCTGTTCTTCACCGGCTGCAGGATCGAGCGCAGCCAGGCTTCCTGACCATTGCCCCGCAGAAGACGGAACGCACCGTTCAGGTGTTCACCACGGCTGATCGCACTTTTCATGCGCTGGTAGAAGTCCAGC < NC_002947/896963‑896817 GGACATCGTCCCCGCCCACGTAAAGTCGCTGGACTTCTACCAGCGCATGAAAAGTGCGATCAGCCGTGGTGAACACCTGAACGGTGCGTTCCGTCTTCTGCGGGGCAATGGTCAGGAAGCCTGGCTGCGCTCGATCCTGCAGCCGGTG > 4:30800/1‑148 ACTTCTACCAGCGCATGAAAAGTGCGATCAGCCGTGGTGAACACCTGAACGGTGCGTTCCGTCTTCTGCGGGGCAATGGTCAGGAAGCCTGGCTGCGCTCGATCCTGCAGCCGGTGAAGTACTTGATGCGCCCCTCGCTGTTCTTCACC < 6:72588/149‑1 CAGCGCATGAAAAGTGCGATCAGCCGTGGTGAACACCTGAACGGTGCGTTCCGTCTTCTGCGGGGCAATGGTCAGGAAGCCTGGCTGCGCTCGATCCTGCAGCCGGTGAAGTACTTGATGCGCCCCTCGCTGTTCTTCACCGGCTGCAG < 7:85176/149‑1 TCAGCCGTGGTGAACACCTGAACGGTGCGTTCCGTCTTCTGCGGGGCAATGGTCAGGAAGCCTGGCTGCGCTCGATCCTGCAGCCGGTGAAGTACTTGATGCGCCCCTCGCTGTTCTTCAC < 7:14985/121‑1 TCAGCCGTGGTGAACACCTGAACGGTGCGTTCCGTCTTCTGCGGGGCAATGGTCAGGAAGCCTGGCTGCGCTCGATCCTGCAGCCGGTGAAGTACTTGATGCGCCCCTCGCTGTTCTTCAC > 8:14985/1‑121 GGTGAAGTACTTGATGCGCCCCTCGCTGTTCTTCACCGGCTGCAGGATCGAGCGCAGCCAGGCTTCCTGACCATTGCCCCGCAGAAGACGGAACGCACCGTTCAGGTGTTCACCACGGCTGATCGCACTTTTCATGCGCTGGTAGAAGT > 3:294211/1‑149 AGTACTTGATGCGCCCCTCGCTGTTCTTCACCGGCTGCAGGATCGAGCGCAGCCAGGCTTCCTGACCATTGCCCCGCAGAAGACGGAACGCACCGTTCAGGTGTTCACCACGGCTGATCGCACTTTTCATGCGCTGGTAGAAGTCCAGC < 6:135825/149‑1 GGACATCGTCCCCGCCCACGTAAAGTCGCTGGACTTCTACCAGCGCATGAAAAGTGCGATCAGCCGTGGTGAACACCTGAACGGTGCGTTCCGTCTTCTGCGGGGCAATGGTCAGGAAGCCTGGCTGCGCTCGATCCTGCAGCCGGTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/896790‑896940‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgaagTACTTGATGCGCCCCTCGCTGTTCTTCACCGGCTGCAGGATCGAGCGCAGCCAGGCTTCCTGACCATTGCCCCGCAGAAGACGGAACGCACCGTTCAGGTGTTCACCACGGCTGATCGCACTTTTCATGCGCTGGTAGAAGTCCAGC < NC_002947/896963‑896817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |