New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 924621	46 (0.940)	3 (0.060)	3/252	NT	6.0%	coding (572/2169 nt)	PP_0804	protein secretion ABC transporter permease/ATP‑binding protein
	?	NC_002947	= 924633	50 (1.060)					coding (560/2169 nt)	PP_0804	protein secretion ABC transporter permease/ATP‑binding protein

CGAGCAGGTCGGTCACCTTTAGCCGCAGCAGGCGCATGCTGAAGTCGAACACCAGTGCCAACACCACACCGCCAAACAGGACGTAGAGAGTGGGTAGGGATTCGGCCGGTATCACTCGGTCGTACACCTGCATCGAGAACAGCACGCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/924469‑924621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaACGTGCTGGCGCTGGCCGGCGTGCTGTTCTCGATGCAGGTGTACGACCGAGTGATACCGGCCGAATCCCTACCCACTCTCTACGTCCTGTTTGGCGGTGTGGTGTTGGCACTGGTGTTCGACTTCAG  <  NC_002947/924633‑924507                                                                                                                                                                                                                                                                                          CGAGCAGGTCGGTCACCTTTAGCCGCAGCAGGCGCATGCTGAAGTCGAACACCAGTGCCAACACCACACCGCCAAACAGGACGTAGAGAGTGGGTAGGGATTCGGCCGGTATCACTCGGTCGTACACCTGCATCGAGAACAGCACGCCG                                                                                                                                     <  3:82010/149‑1                       CCGCAGCAGGCGCATGCTGAAGTCGAACACCAGTGCCAACACCACACCGCCAAACAGGACGTAGAGAGTGGGTAGGGATTCGGCCGGTATCACTCGGTCGTACACCTGCATCGAGAACAGCACGCCGGCCA                                                                                                                                 <  1:100667/131‑1                       CCGCAGCAGGCGCATGCTGAAGTCGAACACCAGTGCCAACACCACACCGCCAAACAGGACGTAGAGAGTGGGTAGGGATTCGGCCGGTATCACTCGGTCGTACACCTGCATCGAGAACAGCACGCCGGCCA                                                                                                                                 >  2:100667/1‑131                                                                                                    ATTCGGCCGGTATCACTCGGTCGTACACCTGCATCGAGAACAGCACGCCGGCCAACGTGCTGGCGCTGGCCGGCGTGCT                                                                                                        <  7:79974/79‑1                                                                                                    ATTCGGCCGGTATCACTCGGTCGTACACCTGCATCGAGAACAGCACGCCGGCCAACGTGCTGGCGCTGGCCGGCGTGCT                                                                                                        >  8:79974/1‑79                                                                                                                                     TCGAGAACAGCACGCCGGCCAGCGCCAGCACGTTGGCCGGCGTGCTGTTCTCGATGCAGGTGTACGCCCGAGTGATACCGGCCGAATCCCTACCCACTCTCTACGTCCTGTTTGGCGGTGTGGTGTTGGCACTGGTGTTCGACTTCAG  >  8:180536/1‑148                                                                                                                                                                                                                                                                                          CGAGCAGGTCGGTCACCTTTAGCCGCAGCAGGCGCATGCTGAAGTCGAACACCAGTGCCAACACCACACCGCCAAACAGGACGTAGAGAGTGGGTAGGGATTCGGCCGGTATCACTCGGTCGTACACCTGCATCGAGAACAGCACGCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/924469‑924621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaACGTGCTGGCGCTGGCCGGCGTGCTGTTCTCGATGCAGGTGTACGACCGAGTGATACCGGCCGAATCCCTACCCACTCTCTACGTCCTGTTTGGCGGTGTGGTGTTGGCACTGGTGTTCGACTTCAG  <  NC_002947/924633‑924507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.