New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1386117 =	53 (1.080)	3 (0.060)	3/250	NT	6.0%	coding (340/1266 nt)	oprD	basic amino acid specific porin OprD
	?	NC_002947	1386160 =	44 (0.940)					coding (297/1266 nt)	oprD	basic amino acid specific porin OprD

AACCGGCCTGGGCTTCGTCGGCACCTTCGAGTCCGGCTTCACCCAAGGCACCGTGGGTGTGGGTGTCGACGCCATCGGCATGCTCGGCCTGAAACTGGACAGCGGCAAGGGCCGTGCCGGTACCGGCCTGTTCCCGACCGGTTCCGACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1386268‑1386117 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggccCTTGCCGCTGTCCAGTTTCAGGCCGAGCATGCCGATGGCGTCGACACCCACACCCACGGTGCCTTGGGTGAAGCCGGACTCGAAGGTGCCGACGAAGCCCAG  >  NC_002947/1386160‑1386261                                                                                                                                                                                                                                                                AACCGGCCTGGGCTTCTGCGGCACCTTCGAGTCCGGCTTCACCCAAGGCACCGTGGGTGTGGGTGTCGACGCCATCGGCATGCTCGGCCTGAAACTGGACAGCGGCAAGGGCCGTGCCGGTACCGGCCTGTTCCCGACCGGTTCCGACG                                                                                                           <  8:269398/149‑1                         CTTCGAGTCCGGCTTCACCCAAGGCACCGTGGGTGTGGGTGTCGACGCCATCGGCATGCTCGGCCTGAAACTGGACAGCGGCAAGGGCCGTGCCGGTACCGGCCTGTTCCCGACCGGTTCCGACGG                                                                                                          <  3:182352/126‑1                         CTTCGAGTCCGGCTTCACCCAAGGCACCGTGGGTGTGGGTGTCGACGCCATCGGCATGCTCGGCCTGAAACTGGACAGCGGCAAGGGCCGTGCCGGTACCGGCCTGTTCCCGACCGGTTCCGACGG                                                                                                          >  4:182352/1‑126                                                                                                          CAAGGGCCGTGCCGGTACCGGCCTGTTCACGACCGGATCCGACGGCCCTTGCCGCTGTCCAGTTTCAGGCCGCGCATGCCGATGGCGTCGACACCCACCCCCACGGTGCATTGGGTGAAGCCGGACTGGATGGTGCCGAAGAAGCCCAG  >  8:214711/1‑149                                                                                                             GGGCCGTGCCGGTACCGGCCTGTTCCCGACCGGTTCCGACGGCCCTTGCCGCTGTCCAGTTTCAGGCCGAGCATGCCGATGGCGTCGACACCCACACCCACGGTGCCTTGGGTGAAGCCGGACTCGAAG                   >  7:160582/1‑129                                                                                                             GGGCCGTGCCGGTACCGGCCTGTTCCCGACCGGTTCCGACGGCCCTTGCCGCTGTCCAGTTTCAGGCCGAGCATGCCGATGGCGTCGACACCCACACCCACGGTGCCTTGGGTGAAGCCGGACTCGAAG                   <  8:160582/129‑1                                                                                                                                                                                                                                                                AACCGGCCTGGGCTTCGTCGGCACCTTCGAGTCCGGCTTCACCCAAGGCACCGTGGGTGTGGGTGTCGACGCCATCGGCATGCTCGGCCTGAAACTGGACAGCGGCAAGGGCCGTGCCGGTACCGGCCTGTTCCCGACCGGTTCCGACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1386268‑1386117 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggccCTTGCCGCTGTCCAGTTTCAGGCCGAGCATGCCGATGGCGTCGACACCCACACCCACGGTGCCTTGGGTGAAGCCGGACTCGAAGGTGCCGACGAAGCCCAG  >  NC_002947/1386160‑1386261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.