| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1419133 = | 28 (0.570) | 3 (0.070) | 3/246 | NT | 12.2% | intergenic (‑251/+106) | PP_1241/PP_1242 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 1419186 = | 17 (0.370) | intergenic (‑304/+53) | PP_1241/PP_1242 | hypothetical protein/hypothetical protein | |||||
AGGCGCTGCTGGATGATGCCGAGTTGGGGATGATGAAAAAGTAAGTGCGAGGAAGCCCTGGAAACGCAAAATATCCCGGGGCTTCACCGATTGCATCATGTCGCAAGCGCACCTTAGCGAGCCCCCACGCTGACAGCTGGAGTGCGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1419282‑1419133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgacatGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTGGTCGCC > NC_002947/1419186‑1419331 AGGCGCTGCTGGATGATGCCGAGTTGGGGATGATGAAAAAGTAAGTGCGAGGAAGCCCTGGAAACGCAAAATATCCCGGGGCTTCACCGATTGCATCATGTCGCAAGCGCACCTTAGCGAGCCCCCACGCTGACAGCTGGAGTGCGACA < 3:301481/149‑1AGGCGCTGCTGGATGATGCCGAGTTGGGGATGATGAAAAAGTAAGTGCGAGGAAGCCCTGGAAACGCAAAATATCCCGGGGCTTCACCGATTGCATCATGTCGCAAGCGCACCTTAGCGAGCCCCCACGCTGACAGCTGGAGTGCGACA > 8:25120/1‑149 CATCATGTCGCAAGCGCACCTTAGCGAGCCCCCACGCTGACAGCTGGAGTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAG > 1:161392/1‑149 ATCATGTCACAAGCGCACCTTAGCGAGCCCCCACGCTGACAGCTGGAGTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTC > 5:305351/1‑105 ATCATGTCACAAGCGCACCTTAGCGAGCCCCCACGCTGACAGCTGGAGTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTC < 6:305351/105‑1 GCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTGGT > 3:227762/1‑149 GCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTGGT > 5:93372/1‑149 CGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTGGTC > 6:159012/1‑149 GACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTGGTCG > 3:261753/1‑149 ACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTG < 3:61525/144‑1 ACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTG > 4:61525/1‑144 ACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATG > 3:217222/1‑123 ACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATG < 4:217222/123‑1 CATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTGGTCGCC > 7:86267/1‑149 AGGCGCTGCTGGATGATGCCGAGTTGGGGATGATGAAAAAGTAAGTGCGAGGAAGCCCTGGAAACGCAAAATATCCCGGGGCTTCACCGATTGCATCATGTCGCAAGCGCACCTTAGCGAGCCCCCACGCTGACAGCTGGAGTGCGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1419282‑1419133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgacatGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCCCAACTCGGCATCATCCAGCAGCGCCTTGGCCATCGCGCTCAGGTAATGCGAGGCCCAGATCAGTTTCTGGTCGCC > NC_002947/1419186‑1419331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |