| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1419133 = | 28 (0.570) | 3 (0.070) | 3/246 | NT | 12.2% | intergenic (‑251/+106) | PP_1241/PP_1242 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 1419186 = | 17 (0.370) | intergenic (‑304/+53) | PP_1241/PP_1242 | hypothetical protein/hypothetical protein | |||||
TGTATACGCCTGCAACGATGTTCGCCTCCCATCGTCGGCGCTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCC > NC_002947/1418987‑1419256 | ggcgaccagaaactgatctgggcctcgcattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATg > 7:86267‑M1/147‑149 (MQ=255) tataCGCCTGCAACGATGTTCGCCTCCCATCGTCGGCGCTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTc < 5:237308/149‑1 (MQ=255) tataCGCCTGCAACGATGTTCGCCTCCCATCGTCGGCGCTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTc < 1:219239/149‑1 (MQ=255) cgaccagaaactgatctgggcctcgcattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGTc > 3:261753‑M1/145‑149 (MQ=255) gaccagaaactgatctgggcctcgcattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGTCg > 6:159012‑M1/144‑149 (MQ=255) accagaaactgatctgggcctcgcattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGTCGc > 3:227762‑M1/143‑149 (MQ=255) accagaaactgatctgggcctcgcattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGTCGc > 5:93372‑M1/143‑149 (MQ=255) cagaaactgatctgggcctcgcattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGt > 4:61525‑M1/141‑144 (MQ=255) cagaaactgatctgggcctcgcattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGt < 3:61525‑M1/4‑1 (MQ=255) ccTGCAACGATGTTCGCCTCCCATCGTCGGCGCTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTc < 4:156405/149‑1 (MQ=255) aaCGATGTTCGCCTCCCATCGTCGGCGCTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTAGATGGCGGTAGAGAATGTCGCACTCCAGCt < 8:138333/149‑1 (MQ=255) aaCGATGTTCGCCTCCCATCGTCGGCGCTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCt > 6:85282/1‑149 (MQ=255) aTGTTCGCCTCCCATCGTCGGCGCTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCa < 7:73322/149‑1 (MQ=255) cattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGt > 3:217222‑M1/120‑123 (MQ=255) cattacctgagcgcgatggccaaggcgctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGt < 4:217222‑M1/4‑1 (MQ=255) gcgcTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGt > 7:63967/1‑149 (MQ=255) gcTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTgc > 5:158777/1‑149 (MQ=255) cTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTgcg < 6:158777/149‑1 (MQ=255) gTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTg < 8:256639/149‑1 (MQ=255) tttGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGc < 1:220200/149‑1 (MQ=255) gcgACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTTAGGTGCGCt > 8:132897/1‑139 (MQ=255) gcgACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCt < 7:132897/139‑1 (MQ=255) cgACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCt > 2:114337/1‑128 (MQ=255) cgACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCt < 1:114337/128‑1 (MQ=255) gACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACatgatg < 8:63967/149‑1 (MQ=255) ctgctggatgatgccgagttggggatgatgaaaaagtaagtgcgaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACatgatg > 1:161392‑M1/93‑149 (MQ=255) cgcgAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGATATGATGCAATCGGTGAAGCCCCgg < 7:45406/149‑1 (MQ=255) gcgAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTg < 2:275226/139‑1 (MQ=255) gcgAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTg > 1:275226/1‑139 (MQ=255) gagcggagcgCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCgg > 7:8297/1‑146 (MQ=255) gagcggagcgCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCgg < 8:8297/146‑1 (MQ=255) gcTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGt < 4:118730/149‑1 (MQ=255) gcTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGt < 3:153827/149‑1 (MQ=255) gCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTc > 2:303647/1‑148 (MQ=255) gaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGTGACatgat > 5:305351‑M1/50‑105 (MQ=255) gaggaagccctggaaacgcaaaatatcccggggcttcaccgattgcatcATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGTGACatgat < 6:305351‑M1/56‑1 (MQ=255) ggTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCac < 3:47169/149‑1 (MQ=255) gTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCact > 1:187810/1‑149 (MQ=255) gTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGACCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTtcat > 3:257115/1‑149 (MQ=255) gAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATccc < 2:187810/149‑1 (MQ=255) gAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATccc < 1:303647/149‑1 (MQ=255) aaaTGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATccc > 6:263052/1‑148 (MQ=255) | TGTATACGCCTGCAACGATGTTCGCCTCCCATCGTCGGCGCTTGGTTTGGCCGCGACGTGATGAGGCTAGGGCGCGAGCGGAGCGCTGGCAACGGATAGCGCGGGTTTGCTGAGCGTTTGGGAAATGGACTACATGGCGGTAGAGAATGTCGCACTCCAGCTGTCAGCGTGGGGGCTCGCTAAGGTGCGCTTGCGACATGATGCAATCGGTGAAGCCCCGGGATATTTTGCGTTTCCAGGGCTTCCTCGCACTTACTTTTTCATCATCCC > NC_002947/1418987‑1419256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |