New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 247328444 (0.900)3 (0.060) 3/252 NT 6.2% coding (812/1851 nt) PP_2167 PhoD‑like phosphatase
?NC_002947 = 2473329 48 (1.020)coding (767/1851 nt) PP_2167 PhoD‑like phosphatase

GCGCCGAGAGGTTCCAGTCGTCCGTGATGTCGTGGTCATCGAAGATCATCAGGCAGGGCAGGTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2473132‑2473284
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcCGGTGCCCTGGCAGCTGGTGGACCTGGGAATCCCCAGCGGGCTCAGCGACGAGCATCAAGCCCGATACCAGCAAGAGCTGCCGCTGATCCAGGGGTTTGCCGACAATCTCGGTCAGGTGGCGCGGGTGATGGCCCACCTGCCCTG  <  NC_002947/2473329‑2473185
                                                                                                                                                                                                                                                                                                          
GCGCCGAGAGGTTCCAGTCGTCCGTGATGTCGTGGTCATCGAAGATCATCAGGCAGGGCAGGTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCG                                                                                                                                                       >  4:225418/1‑149
     GAGAGGTTCCAGTCGTCCGTGATGTCGTGGTCATCGAAGATCATCAGCCAGGGCAGGTGGCCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCATGATGCACGaccct                                                                                                                                                  >  2:222191/1‑144
                                    CATCGAAGATCATCAGGCAGGGCAGGTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCCGGTGCCCTGGCAGCTGGTGGACCTGGGAATC                                                                                                                   >  2:116152/1‑149
                                                        GGCAGGTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCCGGTGCCCTGGCAGCTGGTGGACCTGGGAATCCCCAGCGGGCTCAGCGACGA                                                                                               <  4:213371/149‑1
                                                         GCAGGTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCCGGTGCCCTGGCAGCTGGTGGACCTGGGAATCCCCAGCGGGCTCAGCGACGAG                                                                                              <  1:116152/149‑1
                                                                                                                                                     TCGCCGGTGCCCTGGCAGCTGGTGGACCTGGGAATCCCCAGCGGGCTCAGCGACGAGCATCAAGCCCGATACCAGCAAGAGCTGCCGCTGATCCAGGGGTTTGCCGACAATCTCGGTCAGGTGGCGCGGGTGATGGCCCACCTGCCCTG  >  3:225418/1‑149
                                                                                                                                                     TCGCCGGTGCCCTGGCAGCTGGTGGACCTGGGAATCCCCAGCGGGCTCAGCGACGAGCATCAAGCCCGATACCAGCAAGAGCTGCCGCTGATCCAGGGGTTTGCCGACAATCTCGGTCAGGTGGCGCGGGTGATGGCCCACCTGCCCTG  >  7:80911/1‑149
                                                                                                                                                                                                                                                                                                          
GCGCCGAGAGGTTCCAGTCGTCCGTGATGTCGTGGTCATCGAAGATCATCAGGCAGGGCAGGTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2473132‑2473284
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcCGGTGCCCTGGCAGCTGGTGGACCTGGGAATCCCCAGCGGGCTCAGCGACGAGCATCAAGCCCGATACCAGCAAGAGCTGCCGCTGATCCAGGGGTTTGCCGACAATCTCGGTCAGGTGGCGCGGGTGATGGCCCACCTGCCCTG  <  NC_002947/2473329‑2473185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.