New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2473284	44 (0.900)	3 (0.060)	3/252	NT	6.2%	coding (812/1851 nt)	PP_2167	PhoD‑like phosphatase
	?	NC_002947	= 2473329	48 (1.020)					coding (767/1851 nt)	PP_2167	PhoD‑like phosphatase

CAGGGCAGGTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTGCGTTCCAGCGCCGGCAGCAGGT  >  NC_002947/2473185‑2473476                                                                                                                                                 |                                                                                                                                                    cagggcaggTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGgcga                                                                                                                                                 >  3:225418‑M2/1‑145 (MQ=255) cagggcaggTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGgcga                                                                                                                                                 >  7:80911‑M2/1‑145 (MQ=255)       aggTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCacac                                                                                                                                           >  5:157571/1‑149 (MQ=255)              ccATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCAGCGACCACACCAACAgg                                                                                                                                    <  2:151592/149‑1 (MQ=255)                   aCCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACAt                                                                                                                               >  6:158695/1‑149 (MQ=255)                       gcgcCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGcc                                                                                                                           <  5:247069/149‑1 (MQ=255)                       gcgcCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGc                                                                                                                            >  6:247069/1‑148 (MQ=255)                         gcCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTTCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCAt                                                                                                                         <  1:225881/149‑1 (MQ=255)                           cACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGGCCACACCAACAGGTACATGGCCATGa                                                                                                                       >  1:7304/1‑149 (MQ=255)                           cACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAAc                                                                                                                                       >  2:129302/1‑133 (MQ=255)                           cACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAAc                                                                                                                                       <  1:129302/133‑1 (MQ=255)                           cACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGa                                                                                                                       <  5:92519/149‑1 (MQ=255)                              cTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACtt                                                                                                                    >  1:190251/1‑149 (MQ=255)                              cTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACtt                                                                                                                    >  6:89004/1‑149 (MQ=255)                               tGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTc                                                                                                                   >  5:2892/1‑149 (MQ=255)                                 aCCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTc                                                                                                                   <  2:95343/147‑1 (MQ=255)                                  ccGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGc                                                                                                                <  5:6566/149‑1 (MQ=255)                                   cGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGc                                                                                                                >  7:162788/1‑148 (MQ=255)                                   cGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGc                                                                                                                >  6:23656/1‑148 (MQ=255)                                      gaTTGACGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAg                                                                                                            >  3:266371/1‑149 (MQ=255)                                       aTTGTCGGCAATCCCCTGGATGAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGGCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAg                                                                                                            <  7:229021/148‑1 (MQ=255)                                         tGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCAt                                                                                                                         <  4:211430/133‑1 (MQ=255)                                         tGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCAt                                                                                                                         >  3:211430/1‑133 (MQ=255)                                              gCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAg                                                                                                    <  5:158695/149‑1 (MQ=255)                                              gCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAg                                                                                                    >  7:87144/1‑149 (MQ=255)                                                  aCCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGGCCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAggtgg                                                                                                <  2:7304/149‑1 (MQ=255)                                                      cTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGt                                                                                            >  2:177674/1‑149 (MQ=255)                                                         gATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCgg                                                                                         <  7:219983/149‑1 (MQ=255)                                                         gATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCg                                                                                          <  5:89004/148‑1 (MQ=255)                                                                        ttGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACga                                                                            <  8:162788/147‑1 (MQ=255)                                                                          gCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGc                                                                                                                <  8:262860/109‑1 (MQ=255)                                                                          gCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACgag                                                                           <  6:2892/146‑1 (MQ=255)                                                                          gCTGGTATCGGGCTGGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGc                                                                                                                >  7:262860/1‑109 (MQ=255)                                                                              gTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATc                                                                     <  8:87144/148‑1 (MQ=255)                                                                              gTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATc                                                                     <  4:266371/148‑1 (MQ=255)                                                                                             cTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGgcgacgagcatcaagcccgataccagcaagagctgccgctgatccaggggtttgccgacaatctcggtcaggtggcgcgggtgatggcccacctgc                                                     <  1:116152‑M2/149‑97 (MQ=255)                                                                                              tcgtcgCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGgcgacgagcatcaagcccgataccagcaagagctgccgctgatccaggggtttgccgacaatctcggtcaggtggcgcgggtgatggcccacctgcc                                                    <  4:213371‑M2/149‑98 (MQ=255)                                                                                                    cTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTAGATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGATGCTGGACGAGAACATCGGCTTGCGCTTGCCGCCGaaaaa                                              >  8:172751/1‑149 (MQ=255)                                                                                                          ccGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTc                                        <  1:177674/149‑1 (MQ=255)                                                                                                             cTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTcgcg                                     >  8:76439/1‑149 (MQ=255)                                                                                                                  gATTCCCAGGTCCACCAGCTGCCAGGGCACCGgcgacgagcatcaagcccgataccagcaagagctgccgctgatccaggggtttgccgacaatctcggtcaggtggcgcgggtgatggcccacctgccctgcctgatgatcttcgatg                                >  2:116152‑M2/1‑32 (MQ=255)                                                                                                                     tCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAg                                  >  5:24777/1‑144 (MQ=255)                                                                                                                     tCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAg                                  <  6:24777/144‑1 (MQ=255)                                                                                                                       ccAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTgccgc                                                     >  7:236087/1‑123 (MQ=255)                                                                                                                       ccAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTgccgc                                                     <  8:236087/123‑1 (MQ=255)                                                                                                                       ccAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCg                           >  4:112941/1‑149 (MQ=255)                                                                                                                        cAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGt                          >  3:169388/1‑149 (MQ=255)                                                                                                                              caccaGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTGCGt                     <  6:70542/148‑1 (MQ=255)                                                                                                                               accaGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCTCCGAAAAAACGCTCGCGCAGTGTGTCGTTGCGTTc                   <  6:157571/149‑1 (MQ=255)                                                                                                                                caaGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTTCGTTc                   >  8:261364/3‑148 (MQ=255)                                                                                                                                 caGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTGCGTTc                   >  1:123864/1‑147 (MQ=255)                                                                                                                                       ccAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTGCGTTCCAgcgc             <  1:227680/147‑1 (MQ=255)                                                                                                                                       ccAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTGCGTTCCAGCGCCg           >  8:15602/1‑149 (MQ=255)                                                                                                                                         aGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTGCGTTCCAGCGCCgg          >  8:53331/1‑148 (MQ=255)                                                                                                                                                cGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTGCGTTCCAGCGCCGGCAGCAGGt  <  4:169388/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    CAGGGCAGGTGGGCCATCACCCGCGCCACCTGACCGAGATTGTCGGCAAACCCCTGGATCAGCGGCAGCTCTTGCTGGTATCGGGCTTGATGCTCGTCGCTGAGCCCGCTGGGGATTCCCAGGTCCACCAGCTGCCAGGGCACCGGCGACCACACCAACAGGTACATGGCCATGACTTCGGCGAAGGTCACCAGGTGGTTGTCGGCGTTGCTGGACGAGAAGATCGGCTTGCGCTTGCCGCCGAAAAAACGCTCGCGCAGGGTGTCGTTGCGTTCCAGCGCCGGCAGCAGGT  >  NC_002947/2473185‑2473476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.