| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2555971 = | 44 (0.900) | 4 (0.090) | 4/250 | NT | 8.4% | intergenic (+71/+140) | PP_2240/PP_2241 | ABC transporter permease/ATP‑binding protein/MFS transporter |
| ? | NC_002947 | 2556059 = | 45 (0.960) | intergenic (+159/+52) | PP_2240/PP_2241 | ABC transporter permease/ATP‑binding protein/MFS transporter | |||||
GCTGCTGCGCTGAACCTGGCTAACCTGGCGGTTCGCGACTGCCGCGTATGCAGGTTGAACAGTTCCATCCTGTAACCCGGACGCCCCCGCCGCAGAGGCCGAACGTCTGGACAGGGAGCGCCGCCTGCCGGTGAAGGCGTTCGAGTAAGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2556123‑2555971‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggatgGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCGCAGCAGCGTCAGTCCTGCAAGGGTGGTGACGGCAAAACCCGCACCCACCAGGAAGGTGGCCTGGAACCCTGCACGCTCCCACAGCAATC > NC_002947/2556059‑2556205 GCTGCTGCGCTGAACCTGGCTAACCTGGCGGTTCGCGACTGCCGCGTATGCAGGTTGAACAGTTCCATCCTGTAACCCGGACGCCCCCGCCGCAGAGGCCGAACGTCTGGACAGGGAGCGCCGCCTGCCGGTGAAGGCGTTCGAGTAAG < 5:268193/149‑1GCTGCTGCGCTGAACCTGGCTAACCTGGCGGTTCGCGACTGCCGCGTATGCAGGTTGAACAGTTCCATCCTGTAACCCGGACGCCCCCGCCGCAGAGGCCGAACGTCTGGACAGGGAGCGCCGCCTGCCGGTGAAGGCGTTCGAGTAAG < 5:87959/149‑1GCTGCTGCGCTGAACCTGGCTAACCTGGCGGTTCGCGACTGCCGCGTATGCAGGTTGAACAGTTCCATCCTGTAACCCGGACGCCCCCGCCGCAGAGGCCGAACGTCTGGACAGGGAGCGCCGCCTGCCGGTGAAGGCGTTCGAGTAAG > 8:205296/1‑149 GTTCCATCCTGTAACCCGGACGCCCCCGCCGCAGAGGCCGAACGTCTGGACAGGGAGCGCCGCCTGCCGGTGAAGGCGTTCGAGTAAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGC > 1:238845/1‑149 CCATCCTGTAACCCGGACGCCCCCGCCGCAGAGGCCGAACGTCTGGACAGGGAGCGCCGCCTGCCGGTGAAGGCGTTCGAGTAAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCG > 6:200266/1‑147 TCCTGTAACCCGGACGCCCCCGCCGCAGAGGCCGAACGTCTGGACAGGGAGCGCCGCCTGCCGGTGAAGGCGTTCGAGTAAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCGCAGCA < 5:200266/149‑1 GGCGTTCGAGTAAGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCGCAGCAGCGTCAGTCCTGCAAGGGTGGTGACGGCAAAACCCGCACCCACCAGGAAGGTGGCCTGGAACCCTGCA < 2:238845/149‑1 AGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCGCAGCAGCGTCAGTCCTGCAAGGGTGGTGACGGCAAAACCCGCACCCACCAGGAAGGT < 5:172146/121‑1 AGGATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCGCAGCAGCGTCAGTCCTGCAAGGGTGGTGACGGCAAAACCCGCACCCACCAGGAAGGT > 6:172146/1‑121 GATGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCGCAGCAGCGTCAGTCCTGCAAGGGTGGTGACGGCAAAACCCGCACCCACCAGGAAGGTGGCCTGGAACCCTGCACGCTCCCACAGCA > 7:100823/1‑148 TGGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCGCAGCAGCGTCAGTCCTGCAAGGGTGGTGACGGCAAAACCCGCACCCACCAGGAAGGTGGCCTGGAACCCTGCACGCTCCCACAGCAATC < 2:218495/149‑1 GCTGCTGCGCTGAACCTGGCTAACCTGGCGGTTCGCGACTGCCGCGTATGCAGGTTGAACAGTTCCATCCTGTAACCCGGACGCCCCCGCCGCAGAGGCCGAACGTCTGGACAGGGAGCGCCGCCTGCCGGTGAAGGCGTTCGAGTAAGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2556123‑2555971‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggatgGAACTGTTCAACCTGCATACGCGGCAGTCGCGAACCGCCAGGTTAGCCAGGTTCAGCGCAGCAGCGTCAGTCCTGCAAGGGTGGTGACGGCAAAACCCGCACCCACCAGGAAGGTGGCCTGGAACCCTGCACGCTCCCACAGCAATC > NC_002947/2556059‑2556205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |