New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2563251	30 (0.610)	4 (0.090)	4/248	NT	10.2%	coding (989/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
	?	NC_002947	= 2563333	42 (0.910)					coding (1071/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase

TTCGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2563097‑2563251 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggcACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCCCGCTGCCGACTGGATGCCATAGCCCCCCTGGGCCGCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGC  <  NC_002947/2563333‑2563193                                                                                                                                                                                                                                                                                                          TTCGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCTATGCGCATGCCCCAGCGTTTTTCTG                                                                                                                                                     >  6:139581/1‑149     ACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCTG                                                                                                                                                 >  6:67737/1‑149             TTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCTGGCACACAA                                                                                                                                         >  6:2194/1‑149                gtTATTTACAAAATTGAAGCCATGACCAACCTGGAGATCCGCATCCCGAGCCACACCTGGGCCGGTTTGCGTTCGTTCTTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCT                                                                                                                                                  <  8:172978/135‑1                GGTATTTACATCATTGTAGCCATGACGACCCTGGCGATCCGCCGCCCGAGCGACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGAGGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCT                                                                                                                                                  <  8:168367/137‑1                GGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCAGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTCGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGCCT                                                                                                                                                  >  7:168367/1‑137                GGTATTTACAACATTGAAGCCATGACCAACCTGGCGATCCGCAGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCT                                                                                                                                                  >  7:172978/1‑137                        CAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGG                                                                                                                                                    >  7:287162/1‑127                        CAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGG                                                                                                                                                    <  8:287162/127‑1                                                           GCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCCCGCT                                                                                           >  8:238614/1‑149                                                                                                  CCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCCCGCTGCCGACTGGATGCCATAGCCCCCCTGGGCCGCCAGCCAG                                                    <  5:2194/149‑1                                                                                                    GACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCCCGCTGCCGACTGGATGCCATAGCCCCCCTGGGCCGCCAGCCAGAA                                                  <  7:238614/149‑1                                                                                                                                                     GGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCCCGCTGCCGACTGGATGCCATAGCCCCCCTGGGCCGCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGC  >  1:145293/1‑148                                                                                                                                                                                                                                                                                                          TTCGACGTGGCCTTGGGTATTTACAACATTGAAGCCATGACCACCCTGGCGATCCGCCGCCCGAGCCACACCTGGGCCGGGTTGCGTTCGTTCGTTGCCGACGGCGACCTGGTGATCGGTTTCGATGCGCATGCCCCCGCGTTTTTCTGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2563097‑2563251 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggcACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCCCGCTGCCGACTGGATGCCATAGCCCCCCTGGGCCGCCAGCCAGAAAAACGCGGGGGCATGCGCATCGAAACCGATCACCAGGTCGCCGTCGGC  <  NC_002947/2563333‑2563193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.