New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2654023 =	48 (0.980)	4 (0.090)	4/246	NT	8.5%	coding (338/498 nt)	PP_2326	universal stress protein
	?	NC_002947	2654096 =	41 (0.890)					coding (411/498 nt)	PP_2326	universal stress protein

TTCCTACGCCCCAGATGCTGCGCCAAGGGCACCATGTACACCGGCACCGGCGACAGCTGCAGCAGCCGCACCGCCGTGCGCCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCCGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2654176‑2654023 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctgggGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTGGGGCGTAGGAAAACGTGAAGATAGGTGCAGTCCATTTCCGCGGGCATGTAACAAAATAGTTCTAGATTTATTTC  >  NC_002947/2654096‑2654239                                                                                                                                                                                                                                                                                                            TTCCTACGCCCCAGATGCTGCGCCAAGGGCACCATGTACACCGGCACCGGCGACAGCTGCAGCAGCCGCACCGCCGTGCGCCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCC                                                                                                                                                        <  6:42879/148‑1    CTACGCCCCAGATGCTGCGCCAAGGGCACCATGTACACCGGCACCGGCGACAGCTGCAGCAGCCGCACCGCCGTGCGCCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCCGCTG                                                                                                                                                    <  1:39811/149‑1    CTACGCCCCAGATGCTGCGCCAAGGGCACCATGTACACCGGCACCGGCGACAGCTGCAGCAGCCGCACCGCCGTGCGCCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGC                                                                                                                                                         <  5:47275/144‑1    CTACGCCCCAGATGCTGCGCCAAGGGCACCATGTACACCGGCACCGGCGACAGCTGCAGCAGCCGCACCGCCGTGCGCCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGC                                                                                                                                                         >  6:47275/1‑144     TACGCCCCAGATGCTGCGCCAAGGGCACCATGTACACCGGCACCGGCGACAGCTGCAGCAGCCGCACCGCCGTGCGCCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCCGCTGG                                                                                                                                                   >  8:226209/1‑149                                                                                 CCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCCGCTGGGGCGCAGGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCT                                                                                          >  1:232509/1‑130                                                                                 CCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCT                                                                                          <  2:232509/130‑1                                                                                  CCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGG                                                                                                >  5:256508/1‑123                                                                                  CCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGG                                                                                                <  6:256508/123‑1                                                                                                                                                    CGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTGGGGCGTAGGAAAACGTGAAGATAGGTGCAGTCCATTTCCGCGGGCATGTAACAAAATAGTTCTAGATTTATT    >  8:5957/1‑149                                                                                                                                                      CTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTGGGGCGTAGGAAAACGTGAAGATAGGTGCACTCCATTTCCGCGGGCATGTAACAAAATAGTTCTAGATTTATTTC  <  1:91158/149‑1                                                                                                                                                                                                                                                                                                            TTCCTACGCCCCAGATGCTGCGCCAAGGGCACCATGTACACCGGCACCGGCGACAGCTGCAGCAGCCGCACCGCCGTGCGCCCCAGCGGTACATCCACCCCGGCACCGGCACTGTGGCTACCAAATATCAACAGGTCGACGCTTAGCCGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2654176‑2654023 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctgggGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTGGGGCGTAGGAAAACGTGAAGATAGGTGCAGTCCATTTCCGCGGGCATGTAACAAAATAGTTCTAGATTTATTTC  >  NC_002947/2654096‑2654239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.