New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2654023 =	48 (0.980)	4 (0.090)	4/246	NT	8.5%	coding (338/498 nt)	PP_2326	universal stress protein
	?	NC_002947	2654096 =	41 (0.890)					coding (411/498 nt)	PP_2326	universal stress protein

AGCCAGGGGGTGAACACGGTGATGGCGAACATAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTGGGGCG  >  NC_002947/2653875‑2654170                                                                                                                                                       |                                                                                                                                                    aGCCAGGGGGTGAACACGGTGATGGCGAACATAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGc                                                                                                                                                     <  3:71496/149‑1 (MQ=255)       ggggTGAACACGGTGATGGGGAACATAGAGCAGCGTGTACTGGAAAAGTTTCGCGAGGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCGGGCGCAGGTGATTCTCGACCAGGCCCAGc                                                                                                                                                <  8:240134/148‑1 (MQ=255)       gaaataaatctagaactattttgttacatgcccgcggaaatggagtgcacctatcttcacgttttcctacgccccagatgctgcgccaagggcaccatgtacaccggcaccggcgacagctgcagcagccgcaccgccgtgcgcCCCAg                                                                                                                                                 <  1:91158‑M1/5‑1 (MQ=255)         aataaatctagaactattttgttacatgcccgcggaaatggactgcacctatcttcacgttttcctacgccccagatgctgcgccaagggcaccatgtacaccggcaccggcgacagctgcagcagccgcaccgccgtgcgcCCCAGCg                                                                                                                                               >  8:5957‑M1/143‑149 (MQ=255)          gTGAACACGGTGATGGCGAACATAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGc                                                                                                                                             >  1:195031/1‑148 (MQ=255)                  ggTGATGGCGAACATAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCg                                                                                                                                    >  3:5642/1‑149 (MQ=255)                      aTGGCGAACATAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGAcc                                                                                                                                 <  8:110514/148‑1 (MQ=255)                         gCGAACATAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGtt                                                                                                                             <  2:31400/149‑1 (MQ=255)                             aCATAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGata                                                                                                                         <  4:60510/149‑1 (MQ=255)                                tAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTCATTCTCGACCAGGCCCAGCGGCTAAGCGTCCACCTCTTCATAttt                                                                                                                      >  2:153188/1‑149 (MQ=255)                                 agagCTGCGTGTTCTGGATAACTTTCGCGTCGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCTAGGCCGTGCGTGTGCGGCTGGG‑CG‑ACGCGGCGCTGGTGATTCTCGACCAGGGCCAGCGGCTTAGCGTCGAGCTGTTTATAttt                                                                                                                      <  6:83552/148‑1 (MQ=255)                                  gagCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTg                                                                                                                     <  5:250896/148‑1 (MQ=255)                                   agcagcGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTgg                                                                                                                    >  7:77331/1‑148 (MQ=255)                                    gcagcGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTgg                                                                                                                    >  4:278308/1‑147 (MQ=255)                                          tgtACTGGAAAACTTTCGCAACGAGTTGGGCGAAGAGTCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCTGCGCAGGTGATTCTCGACCAGGCCCAGCTGCTAAGCGTCGACCTGTTGATATTTGGTCGCcaca                                                                                                            <  6:238158/149‑1 (MQ=255)                                              cTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAgtgc                                                                                                        >  6:162085/1‑149 (MQ=255)                                               tGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCca                                                                                                              <  8:228588/142‑1 (MQ=255)                                               tGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCca                                                                                                              >  7:228588/1‑142 (MQ=255)                                                   aaaCTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAgtgccggt                                                                                                    <  1:153188/148‑1 (MQ=255)                                                         tCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGAAGGGTAGAACCCGGCGCAGTTGATAATCGACCAGGCCCAGCGGATAACCGTCGACCTGTTGATTTTTGTAAGCCACAGtgccggtcccgg                                                                                               >  1:246230/1‑149 (MQ=255)                                                            cgacgaGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTg                                                                                           >  1:6660/1‑148 (MQ=255)                                                             gacgaGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGa                                                                                         <  8:77331/149‑1 (MQ=255)                                                                 aGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTa                                                                                     >  7:164554/1‑149 (MQ=255)                                                                 aGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTa                                                                                     >  7:160105/1‑149 (MQ=255)                                                                  gTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTAc                                                                                    <  7:174346/149‑1 (MQ=255)                                                                  gTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTCCCGGGGTGGATGTAc                                                                                    >  7:50419/1‑149 (MQ=255)                                                                     gggCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTgg                                                                                          >  2:299382/1‑140 (MQ=255)                                                                     gggCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTgg                                                                                          <  1:299382/140‑1 (MQ=255)                                                                              ggCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCcac                                                                                                             >  2:63772/1‑112 (MQ=255)                                                                               gCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGccc                                                                                                                                                   >  4:222256/1‑73 (MQ=255)                                                                                 tGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCAcgg                                                                     >  5:251515/1‑149 (MQ=255)                                                                                   aCCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑GG‑ACCCGGCGCAGGTGAGTCTCGACCAGGCCCAGCTGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCAcggcg                                                                   <  4:15116/149‑1 (MQ=255)                                                                                        gCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGc                                                               <  2:195031/148‑1 (MQ=255)                                                                                               gcatggCCGGGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGGGATTCTCGACCAGGCCCAGCGGCTTAGCGTCGACCTGTTGATATTTGGTAGCCAGAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGctgctg                                                       <  8:50419/145‑1 (MQ=255)                                                                                               agggcaccatgtacaccggcaccggcgacagctgcagcagccgcaccgccgtgcgcCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTgggg                                                                            <  2:232509‑M1/74‑1 (MQ=255)                                                                                               agggcaccatgtacaccggcaccggcgacagctgcagcagccgcaccgccctgcgcCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTgggg                                                                            >  1:232509‑M1/57‑130 (MQ=255)                                                                                                 aaGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGAATCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGctgctg                                                       >  3:34759/1‑147 (MQ=255)                                                                                                  aGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAg                                                    <  8:164554/149‑1 (MQ=255)                                                                                                  aGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAg                                                    <  8:160105/149‑1 (MQ=255)                                                                                                    gCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCt                                                  <  5:162085/149‑1 (MQ=255)                                                                                                     ccatgtacaccggcaccggcgacagctgcagcagccgcaccgccgtgcgcCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTggg                                                                             >  5:256508‑M1/51‑123 (MQ=255)                                                                                                     ccatgtacaccggcaccggcgacagctgcagcagccgcaccgccgtgcgcCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTggg                                                                             <  6:256508‑M1/73‑1 (MQ=255)                                                                                                            tgtgCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCgccgg                                          >  1:62966/1‑149 (MQ=255)                                                                                                                cGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCgccggtgcc                                      <  5:31330/149‑1 (MQ=255)                                                                                                                 ggCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCgccggtgccg                                     <  2:246230/149‑1 (MQ=255)                                                                                                                  gCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCgccggtgccgg                                    <  3:278308/149‑1 (MQ=255)                                                                                                                   ctggg‑CG‑ACCCGGCGCAGGTGATTCTCGACGAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCgccggtgccggt                                   <  4:34759/147‑1 (MQ=255)                                                                                                                   cAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCgccggtgccggt                                   <  2:6660/149‑1 (MQ=255)                                                                                                                   cAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCgccggtgccggt                                   <  4:5642/149‑1 (MQ=255)                                                                                                                       g‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTa                                >  7:226209/1‑148 (MQ=255)                                                                                                                                   gaaGGTGATTCTCGACCAGGCCCAGCGGATAAGCGTCGAACTGTTGATAATTGGTAGCCACAGTGCCCGTGCCCGCGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGAAGCTGTCGCCGGTGCCGGTGTACATGCTAccca                     >  4:275969/3‑148 (MQ=255)                                                                                                                                            tctcGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTg                                                 <  7:245232/112‑1 (MQ=255)                                                                                                                                            tctcGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTg                                                 >  8:245232/1‑112 (MQ=255)                                                                                                                                            tctcGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCgcag             >  4:26654/1‑148 (MQ=255)                                                                                                                                                 aCCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTg       >  7:107256/1‑149 (MQ=255)                                                                                                                                                 aCCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTg       >  2:91158/1‑149 (MQ=255)                                                                                                                                                  ccAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTgg      <  7:29568/149‑1 (MQ=255)                                                                                                                                                   cAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTggg     <  2:62966/149‑1 (MQ=255)                                                                                                                                                     ggCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTGGGGc   >  3:17320/1‑149 (MQ=255)                                                                                                                                                      gCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTGGGGCg  >  2:42960/1‑149 (MQ=255)                                                                                                                                                       |                                                                                                                                                    AGCCAGGGGGTGAACACGGTGATGGCGAACATAGAGCAGCGTGTACTGGAAAACTTTCGCGACGAGTTGGGCGAAGAGGCTGACCTGGCGGTGATCAAGGCCGTGCGTGTGCGGCAGGG‑CG‑ACCCGGCGCAGGTGATTCTCGACCAGGCCCAGCGGCTAAGCGTCGACCTGTTGATATTTGGTAGCCACAGTGCCGGTGCCGGGGTGGATGTACCGCTGGGGCGCACGGCGGTGCGGCTGCTGCAGCTGTCGCCGGTGCCGGTGTACATGGTGCCCTTGGCGCAGCATCTGGGGCG  >  NC_002947/2653875‑2654170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.