New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 271894833 (0.670)4 (0.090) 4/248 NT 10.5% coding (75/585 nt) nfuA Fe/S biogenesis protein NfuA
?NC_002947 = 2718974 37 (0.800)coding (101/585 nt) nfuA Fe/S biogenesis protein NfuA

CTTTCCCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2718795‑2718948
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcTGGGTGATGAAAATGCGAATGCCGATGCCGGGCGTATTCTGCTTGGAGAGCAGATCGGCCAGGTAGTCATGGGCGGCGTCGGTAATGGTTATAGCGCTCATGTAGGTTCCTCACAGACTTGCGGCCAAGTGTACGCCAACCCAG  <  NC_002947/2718974‑2718831
                                                                                                                                                                                                                                                                                                          
CTTTCCCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGC                                                                                                                                                       >  5:53039/1‑149
     CCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAAACATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGC                                                                                                                                                  >  4:269541/1‑149
                             TCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCTGGGTGATGAAAATGCGAATGCC                                                                                                                           >  3:136988/1‑148
                                       GGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCTGGGTGATGAAAATGCGAATGCCGATGCCGGGCG                                                                                                                <  4:136988/149‑1
                                       GGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCTGGGTGATGAAAATGCGAATGCCGATGCCGGGC                                                                                                                 <  3:269541/148‑1
                                             CGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCTGGGTGATGAAAATGCGAATGCCGATGCCGGGCGTATTCT                                                                                                          <  6:53039/149‑1
                                                                                                                                                     CCGGCTGGGTGATGAAAATGCGAATGCCGATGCCGGGCGTATTCTGCTTGGAGAGCAGATCGGCCAGGTAGTCATGGGCGGCGTCGGTAATGGTTATAGCGCTCATGTAGGTTCCTCACAGACTTGCGGCCAAGTGTACGCCAACCCAG  >  1:270701/1‑149
                                                                                                                                                                                                                                                                                                          
CTTTCCCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2718795‑2718948
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcTGGGTGATGAAAATGCGAATGCCGATGCCGGGCGTATTCTGCTTGGAGAGCAGATCGGCCAGGTAGTCATGGGCGGCGTCGGTAATGGTTATAGCGCTCATGTAGGTTCCTCACAGACTTGCGGCCAAGTGTACGCCAACCCAG  <  NC_002947/2718974‑2718831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.