New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2718948	33 (0.670)	4 (0.090)	4/248	NT	10.5%	coding (75/585 nt)	nfuA	Fe/S biogenesis protein NfuA
	?	NC_002947	= 2718974	37 (0.800)					coding (101/585 nt)	nfuA	Fe/S biogenesis protein NfuA

GAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCTGGAAGACGCGCTGGTCGAC  >  NC_002947/2718826‑2719119                                                                                                                                                     |                                                                                                                                                   gAAGGCTGGGTTGGCCTACACTTGGCCGCATGTCTGTGAGGAACCTACATGAGCGCTATAACGATTACCGACGCCGCCCATGACGACCTGGCCGATCTGCTCTCCAAGCACAATAAGCCCGGCATCGGCATTCGCAGTTTCATCACCCa                                                                                                                                                    >  6:288919/1‑149 (MQ=255)      cTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAgccgg                                                                                                                                               >  1:270701‑M2/1‑144 (MQ=255)                           cGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGt                                                                                                                          <  5:258175/149‑1 (MQ=255)                                   tgtgAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGcc                                                                                                                                 >  4:285680/1‑134 (MQ=255)                                     tgAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTa                                                                                                                >  1:266538/1‑149 (MQ=255)                                               aCATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAg                                                                                                                                       <  1:171436/116‑1 (MQ=255)                                               aCATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAg                                                                                                                                       >  2:171436/1‑116 (MQ=255)                                                 aTGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCggg                                                                                                    <  7:72663/149‑1 (MQ=255)                                                     gcgcTATAACCATTACCGACGCCGCCCATGAATACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGATACGTGCATCGCCTACTGCAAGCCGGGCGaa                                                                                                <  7:132322/149‑1 (MQ=255)                                                                       aCGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACAcc                                                                              >  2:36024/1‑149 (MQ=255)                                                                           cgccCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACAccgccg                                                                          >  8:233900/1‑149 (MQ=255)                                                                                           gCCGTTCTGCGCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGGCGGGCACCCAGTACGCCGAGACGTGCTTCGCCTACTGCAAGCCGGGCGAAGTGAAGCCTGACGACACCGCCG‑GGGGTCTGAAAAGCtt                                                         <  7:99537/149‑1 (MQ=255)                                                                                             cGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCa                                                       >  6:66711/1‑149 (MQ=255)                                                                                               aTCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACt                                                     >  2:298958/1‑149 (MQ=255)                                                                                                 cTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGc                                                   >  6:286242/1‑149 (MQ=255)                                                                                                    ctctCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTg                                                    <  2:266538/145‑1 (MQ=255)                                                                                                    ctctCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTg                                                    <  6:306477/145‑1 (MQ=255)                                                                                                    ctctCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGc                                                   <  1:276483/146‑1 (MQ=255)                                                                                                    ctctCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTa                                                >  4:178541/1‑149 (MQ=255)                                                                                                         cAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCtt                                            >  2:128945/1‑148 (MQ=255)                                                                                                          aaGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTc                                                                   <  1:115672/124‑1 (MQ=255)                                                                                                          aaGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTc                                                                   >  2:115672/1‑124 (MQ=255)                                                                                                          aaGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGa                                          >  3:118386/1‑149 (MQ=255)                                                                                                            gCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCGATGGGTCTGAAAAGCTTCACTGCTTACCTTGAc                                         <  1:36024/149‑1 (MQ=255)                                                                                                            gCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACg                                        >  7:4404/1‑149 (MQ=255)                                                                                                              aGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAgccgggcgtattctgcttggagagcagatcggccaggtagtcatgggcggcgtcggtaatggttatagcgctcatgtaggttcctcacagacttgcggccaagtgtacg                                       <  6:53039‑M2/149‑110 (MQ=255)                                                                                                                    cGCCCGGCATCGGCATTCGCATTTTCATCACCCAgccgggcgtattctgcttggagagcagatcggccaggtagtcatgggcggcgtcggtaatggttatagcgctcatgtaggttcctcacagacttgcggccaagtgtacgccaacc                                 <  4:136988‑M2/149‑116 (MQ=255)                                                                                                                     gCCCGGCATCGGCATTCGCATTTTCATCACCCAgccgggcgtattctgcttggagagcagatcggccaggtagtcatgggcggcgtcggtaatggttatagcgctcatgtaggttcctcacagacttgcggccaagtgtacgccaacc                                 <  3:269541‑M2/148‑116 (MQ=255)                                                                                                                     gCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCg                               >  5:19676/1‑149 (MQ=255)                                                                                                                           aatcggcatTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCt                         <  7:233900/148‑1 (MQ=255)                                                                                                                              cggcatTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTcc                      >  3:271191/1‑149 (MQ=255)                                                                                                                               ggcatTCGCATTTTCATCACGCAGCCGGGCACCCAGTACGCGGAGACGTGCATCGCCTCCTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAACATCTTCACTGCTTACCTTGACCCCGTCAGCGTACCCTTCCt                     <  5:288919/149‑1 (MQ=255)                                                                                                                               ggcatTCGCATTTTCATCACCCAgccgggcgtattctgcttggagagcagatcggccaggtagtcatgggcggcgtcggtaatggttatagcgctcatgtaggttcctcacagacttgcggccaagtgtacgccaacccagccttcga                       >  3:136988‑M2/1‑23 (MQ=255)                                                                                                                               ggcatTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCt                     <  5:286242/149‑1 (MQ=255)                                                                                                                                 catTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCTgg                   <  5:66711/149‑1 (MQ=255)                                                                                                                                   ttCGCATTTTCATCACCCAGCCGGGCCCCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACCGCTTACCTTGACGCCGTCAGCGTACCCTTCCTgg                   >  8:41309/1‑147 (MQ=255)                                                                                                                                   ttCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGACGTCAGCGTACCCTTCCTgg                   >  1:38576/1‑147 (MQ=255)                                                                                                                                      gCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTc                       >  2:153187/1‑140 (MQ=255)                                                                                                                                      gCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTc                       <  1:153187/140‑1 (MQ=255)                                                                                                                                        aTTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCTGGAAGAcgc            >  7:95462/1‑149 (MQ=255)                                                                                                                                        aTTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCTGGAAGAcgc            >  2:118225/1‑149 (MQ=255)                                                                                                                                         ttttCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCTGGAAGAcgcg           >  3:187903/1‑149 (MQ=255)                                                                                                                                            tcatcaCCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCTGGAAGACGCGCt         >  3:132687/1‑148 (MQ=255)                                                                                                                                                  cccAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCTGGAAGACGCGCTGGTCGAc  >  2:308811/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGTACCCTTCCTGGAAGACGCGCTGGTCGAC  >  NC_002947/2718826‑2719119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.