New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2718948	33 (0.670)	4 (0.090)	4/248	NT	10.5%	coding (75/585 nt)	nfuA	Fe/S biogenesis protein NfuA
	?	NC_002947	= 2718974	37 (0.800)					coding (101/585 nt)	nfuA	Fe/S biogenesis protein NfuA

CCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGT  >  NC_002947/2718800‑2719091                                                                                                                                                     |                                                                                                                                                 ccGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAAACATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGC                                                                                                                                                  >  4:269541‑M1/1‑149 (MQ=255)     gTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCcggcatcg                                                                                                                                              <  7:66297/149‑1 (MQ=255)            gCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCg                                                                                                                                       >  2:270701/1‑149 (MQ=255)                ggACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCAtt                                                                                                                                   >  6:258175/1‑149 (MQ=255)                  aCTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCAtttt                                                                                                                                 <  3:200737/149‑1 (MQ=255)                         tCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCtgggtgatgaaaatgcgaatgcc                                                                                                                           >  3:136988‑M1/1‑125 (MQ=255)                           gAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGAATTTTCATCAcc                                                                                                                          >  5:306477/1‑147 (MQ=255)                           gAAGGCTGGGTTGGCCTACACTTGGCCGCATGTCTGTGAGGAACCTACATGAGCGCTATAACGATTACCGACGCCGCCCATGACGACCTGGCCGATCTGCTCTCCAAGCACAATAAGCCCGGCATCGGCATTCGCAGTTTCATCACCCa                                                                                                                        >  6:288919/1‑149 (MQ=255)                                cTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAgccgg                                                                                                                   >  1:270701‑M2/1‑144 (MQ=255)                                   ggTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCtgggtgatgaaaatgcgaatgccgatgccgggcg                                                                                                                <  4:136988‑M1/149‑35 (MQ=255)                                   ggTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCtgggtgatgaaaatgcgaatgccgatgccgggc                                                                                                                 <  3:269541‑M1/148‑34 (MQ=255)                                         cGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCtgggtgatgaaaatgcgaatgccgatgccgggcgtattct                                                                                                          <  6:53039‑M1/149‑41 (MQ=255)                                               cTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTtc                                                                                                                                <  7:184276/121‑1 (MQ=255)                                               cTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTACAAGCAGAATACGCCCGGCATCGGCATTCGCATTTtc                                                                                                                                >  8:184276/1‑121 (MQ=255)                                                ttGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGTCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTc                                                                                                                                        <  2:41920/112‑1 (MQ=255)                                                ttGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTc                                                                                                                                        >  1:41920/1‑112 (MQ=255)                                                     cGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGt                                                                                              <  5:258175/149‑1 (MQ=255)                                                             tgtgAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGcc                                                                                                     >  4:285680/1‑134 (MQ=255)                                                               tgAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTa                                                                                    >  1:266538/1‑149 (MQ=255)                                                                         aCATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAg                                                                                                           <  1:171436/116‑1 (MQ=255)                                                                         aCATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAg                                                                                                           >  2:171436/1‑116 (MQ=255)                                                                           aTGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCggg                                                                        <  7:72663/149‑1 (MQ=255)                                                                               gcgcTATAACCATTACCGACGCCGCCCATGAATACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGATACGTGCATCGCCTACTGCAAGCCGGGCGaa                                                                    <  7:132322/149‑1 (MQ=255)                                                                                         cATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCcggcatcg                                                                                                                                              >  2:300350/1‑65 (MQ=255)                                                                                         cATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCcggcatcg                                                                                                                                              <  1:300350/65‑1 (MQ=255)                                                                                                 aCGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACAcc                                                  >  2:36024/1‑149 (MQ=255)                                                                                                     cgccCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACAccgccg                                              >  8:233900/1‑149 (MQ=255)                                                                                                                     gCCGTTCTGCGCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGGCGGGCACCCAGTACGCCGAGACGTGCTTCGCCTACTGCAAGCCGGGCGAAGTGAAGCCTGACGACACCGCCG‑GGGGTCTGAAAAGCtt                             <  7:99537/149‑1 (MQ=255)                                                                                                                       cGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCa                           >  6:66711/1‑149 (MQ=255)                                                                                                                         aTCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACt                         >  2:298958/1‑149 (MQ=255)                                                                                                                           cTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGc                       >  6:286242/1‑149 (MQ=255)                                                                                                                              ctctCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTg                        <  6:306477/145‑1 (MQ=255)                                                                                                                              ctctCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTg                        <  2:266538/145‑1 (MQ=255)                                                                                                                              ctctCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGc                       <  1:276483/146‑1 (MQ=255)                                                                                                                              ctctCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTa                    >  4:178541/1‑149 (MQ=255)                                                                                                                                   cAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCtt                >  2:128945/1‑148 (MQ=255)                                                                                                                                    aaGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTc                                       >  2:115672/1‑124 (MQ=255)                                                                                                                                    aaGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTc                                       <  1:115672/124‑1 (MQ=255)                                                                                                                                    aaGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGa              >  3:118386/1‑149 (MQ=255)                                                                                                                                      gCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCGATGGGTCTGAAAAGCTTCACTGCTTACCTTGAc             <  1:36024/149‑1 (MQ=255)                                                                                                                                      gCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACg            >  7:4404/1‑149 (MQ=255)                                                                                                                                        aGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAgccgggcgtattctgcttggagagcagatcggccaggtagtcatgggcggcgtcggtaatggttatagcgctcatgtaggttcctcacagacttgcggccaagtgtacg           <  6:53039‑M2/149‑110 (MQ=255)                                                                                                                                              cGCCCGGCATCGGCATTCGCATTTTCATCACCCAgccgggcgtattctgcttggagagcagatcggccaggtagtcatgggcggcgtcggtaatggttatagcgctcatgtaggttcctcacagacttgcggccaagtgtacgccaacc     <  4:136988‑M2/149‑116 (MQ=255)                                                                                                                                               gCCCGGCATCGGCATTCGCATTTTCATCACCCAgccgggcgtattctgcttggagagcagatcggccaggtagtcatgggcggcgtcggtaatggttatagcgctcatgtaggttcctcacagacttgcggccaagtgtacgccaacc     <  3:269541‑M2/148‑116 (MQ=255)                                                                                                                                               gCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCg   >  5:19676/1‑149 (MQ=255)                                                                                                                                                 ccGGCtgggtgatgaaaatgcgaatgccgatgccgggcgtattctgcttggagagcagatcggccaggtagtcatgggcggcgtcggtaatggttatagcgctcatgtaggttcctcacagacttgcggccaagtgtacgccaacccag  >  1:270701‑M1/1‑5 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CCGAGTCAATTGCTAGGACTTTGTTCGAAGGCTGGGTTGGCGTACACTTGGCCGCAAGTCTGTGAGGAACCTACATGAGCGCTATAACCATTACCGACGCCGCCCATGACTACCTGGCCGATCTGCTCTCCAAGCAGAATACGCCCGGCATCGGCATTCGCATTTTCATCACCCAGCCGGGCACCCAGTACGCCGAGACGTGCATCGCCTACTGCAAGCCGGGCGAAGAGAAGCCTGACGACACCGCCG‑TGGGTCTGAAAAGCTTCACTGCTTACCTTGACGCCGTCAGCGT  >  NC_002947/2718800‑2719091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.