New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2929376 = | 41 (0.840) | 5 (0.110) | 5/250 | NT | 12.2% | coding (4726/4890 nt) | PP_2566 | leucine‑rich repeat‑containing protein |
? | NC_002947 | 2929412 = | 33 (0.710) | coding (4690/4890 nt) | PP_2566 | leucine‑rich repeat‑containing protein |
TCGAGTACTTGAAACGAGAGCATGCGGCCCAGTTCAGCCTGATCACCGACTTTTGGCGGCCAGGCCTTGATTACCTCTATTACTGCCTAGATGAAACCGCCGAGCCGGTGACATCCCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2929525‑2929376 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagggATGTCACCGGCTCGGCGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTTCAAGTACTCGACCCAGCCCGGCTGCTGGGTCAACCATTGCTCCC > NC_002947/2929412‑2929558 TCGAGTACTTGAAACGAGAGCATGCGGCCCAGTTCAGCCTGATCACCGACTTTTGGCGGCCAGGCCTTGATTACCTCTATTACTGCCTAGATGAAACCGCCGAGTCGGTGACATCCCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGG < 7:38634/149‑1 TCGAGTACTTGAAACGAGAGCATGCGGCCCAGTTCAGCCTGATCACCGACTTTTGGCGGCCAGGCCTTGATTACCTCTATTACTGCCTAGATGAAACCGCCGAGCCGGTGACATCCCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGG < 7:159596/149‑1 GAGTACTTGAAACGAGAGCATGCGGCCCAGTTCAGCCTGATCACCGACTTTTGGCGGCCAGGCCTTGATTACCTCTATTACTGCCTAGATGAAACCGCCGAGCCGGTGACATCCCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGGG < 5:296077/148‑1 CCGGTGACATCCCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGGGATGTCACCGGCTCGGCGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTT > 3:229900/1‑149 GTGACATCCCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGGGATGTCACCGGCTCGGCGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTTCAA < 4:229900/149‑1 CCCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGGGATGTCACCGGCTCGGCGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTTCAAGTACTC > 8:12940/1‑148 CCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGGGATGTCACCGGCTCGGCGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTTCAAGTACTCGA > 6:306962/1‑149 GACGAGCCTTGGCCAGGGATGTCACCGGCTCGGCGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTTCAAGTACTCGACCCAGCCCGGCTGCTGG < 7:12940/149‑1 GGGATGTCACCGGCTCGGCGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTTCAAGTACTCGACCCAGCCCGGCTGCTGGGTCAACCATTGCTCC < 8:159596/149‑1 GATGTCACCGGCTCGGAGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTTCAAGTACTCGACCCAGCCCGGCTGCTGGGTCAACCATTGCTCCC > 4:110999/1‑148 TCGAGTACTTGAAACGAGAGCATGCGGCCCAGTTCAGCCTGATCACCGACTTTTGGCGGCCAGGCCTTGATTACCTCTATTACTGCCTAGATGAAACCGCCGAGCCGGTGACATCCCTGGACAGCTCGGTGCGACGAGCCTTGGCCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2929525‑2929376 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagggATGTCACCGGCTCGGCGGTTTCATCTAGGCAGTAATAGAGGTAATCAAGGCCTGGCCGCCAAAAGTCGGTGATCAGGCTGAACTGGGCCGCATGCTCTCGTTTCAAGTACTCGACCCAGCCCGGCTGCTGGGTCAACCATTGCTCCC > NC_002947/2929412‑2929558 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |