| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3056145 = | 32 (0.650) | 6 (0.130) | 6/256 | NT | 16.2% | coding (217/741 nt) | PP_2668 | ABC transporter ATP‑binding protein |
| ? | NC_002947 | 3056203 = | 31 (0.650) | coding (159/741 nt) | PP_2668 | ABC transporter ATP‑binding protein | |||||
TTTCAGCCTGGCACCCGGGCGCTTCGCCGCATTGCTGGGCCCCAATGGTGCCGGCAAGTCGACCTTGATCGCCCTGCTCACGCGCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCACGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3056293‑3056145‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGG > NC_002947/3056203‑3056305 TTTCAGCCTGGCACCCGGGCGCTTCGCCGCATTGCTGGGCCCCAATGGTGCCGGCAAGTCGACCTTGATCGCCCTGCTCACGCGCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCACGTC < 3:242184/149‑1 GCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCACGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCA > 2:286490/1‑149 TACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCACGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGC > 3:25764/1‑124 TACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCACGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGC < 4:25764/124‑1 TGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGA > 8:116950/1‑149 CAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCT‑‑‑‑‑ACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCG > 5:143454/1‑149 GGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGG < 7:116950/149‑1 TTTCAGCCTGGCACCCGGGCGCTTCGCCGCATTGCTGGGCCCCAATGGTGCCGGCAAGTCGACCTTGATCGCCCTGCTCACGCGCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCACGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3056293‑3056145‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGG > NC_002947/3056203‑3056305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |