New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3056145 =	32 (0.650)	6 (0.130)	6/256	NT	16.2%	coding (217/741 nt)	PP_2668	ABC transporter ATP‑binding protein
	?	NC_002947	3056203 =	31 (0.650)					coding (159/741 nt)	PP_2668	ABC transporter ATP‑binding protein

AGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACGTCACTGACGTCGA  >  NC_002947/3056055‑3056351                                                                                                                                                     |                                                                                                                                                     aGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCg                                                                                                                                                      <  4:132734/149‑1 (MQ=255)        tggcacccgggcgcttcgccgcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgc                                                                                                                                               >  2:286490‑M1/84‑149 (MQ=255)        gTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgc                                                                                                                                               <  6:51540/149‑1 (MQ=255)           gTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgcgc                                                                                                                                             <  3:24630/148‑1 (MQ=255)           gTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGcgcg                                                                                                                                            >  4:135811/1‑149 (MQ=255)                       cTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCg                                                                                                                                 <  7:140397/148‑1 (MQ=255)                            gcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTa                                                                                                                                                    <  4:25764‑M1/61‑1 (MQ=255)                            gcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTa                                                                                                                                                    >  3:25764‑M1/64‑124 (MQ=255)                                       tccaggtccaggGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgc                                                                                                                                               <  5:93690/118‑1 (MQ=255)                                       tccaggtccaggGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgc                                                                                                                                               >  6:93690/1‑118 (MQ=255)                                            gtccaggGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCAc                                                                                                           <  7:182625/149‑1 (MQ=255)                                                         ttcTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCa                                                                                               <  8:53366/146‑1 (MQ=255)                                                                  accacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCAc                                                                                                           >  5:60607/1‑127 (MQ=255)                                                                  accacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCAc                                                                                                           <  6:60607/127‑1 (MQ=255)                                                                   ccacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCAGACTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATgcggc                                                                                     >  1:95840/1‑148 (MQ=255)                                                                   ccacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCGGCAATgcggc                                                                                     >  4:220346/1‑148 (MQ=255)                                                                   ccacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATgcggc                                                                                     >  8:147146/1‑148 (MQ=255)                                                                     acaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGaa                                                                                  <  7:147146/149‑1 (MQ=255)                                                                                   gcctgtacgacctgcagcgtggcgacatccgcgtgtgcggctgctcgctacgcaacgctgcacgtcGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCa                                                                    >  2:286490‑M2/67‑149 (MQ=255)                                                                                     aGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAgg                                                                  <  3:135811/149‑1 (MQ=255)                                                                                        tacgacctgcagcgtggcgacatccgcgtgtgcggctgctcgctacgcaacgctgcacgtcGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATgc                                                                                        >  3:25764‑M2/62‑124 (MQ=255)                                                                                        tacgacctgcagcgtggcgacatccgcgtgtgcggctgctcgctacgcaacgctgcacgtcGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATgc                                                                                        <  4:25764‑M2/63‑1 (MQ=255)                                                                                           GACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGaaa                                                            <  3:242184‑M1/149‑1 (MQ=255)                                                                                               tgcagcgtggcgacatccgcgtgtgcggctgctcgctacgcaacgctgcaggtcGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGa                                                        >  8:116950‑M2/55‑149 (MQ=255)                                                                                                 cAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGAcc                                                      >  7:74659/1‑149 (MQ=255)                                                                                                      ttGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGa                                                                                                                                         <  3:109387/61‑1 (MQ=255)                                                                                                      ttGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGa                                                                                                                                         >  4:109387/1‑61 (MQ=255)                                                                                                      ttGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCg                                                 >  8:97268/1‑149 (MQ=255)                                                                                                      cagcgtggcgacatccgcgtgtgcggctgctcgctacgctgcaggtcGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCg                                                 >  5:143454‑M2/48‑149 (MQ=255)                                                                                                       ggcgacatccgcgtgtgcggctgctcgctacgcaacgctgcaggtcGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCgg                                                <  7:116950‑M2/103‑1 (MQ=255)                                                                                                           tAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGaac                                             >  4:251348/1‑146 (MQ=255)                                                                                                               gAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTc                                        >  1:141429/1‑149 (MQ=255)                                                                                                                      cGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCGGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTg                                  <  3:220346/148‑1 (MQ=255)                                                                                                                      cGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTgg                                 >  2:210155/1‑149 (MQ=255)                                                                                                                            cgcgGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAg                           <  1:210155/149‑1 (MQ=255)                                                                                                                                   gTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGc                    >  3:8135/1‑149 (MQ=255)                                                                                                                                   ctCGCTACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCaaa                      <  6:143454/146‑1 (MQ=255)                                                                                                                                      gCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCa                 >  3:74806/1‑149 (MQ=255)                                                                                                                                       ccACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCAc                >  4:231424/1‑149 (MQ=255)                                                                                                                                       ccACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCAc                >  7:82902/1‑149 (MQ=255)                                                                                                                                        cACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATTCGGCGAAGCGCCCGTGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCAc                >  4:210295/1‑148 (MQ=255)                                                                                                                                        cACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACg               >  4:277358/1‑149 (MQ=255)                                                                                                                                             tGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACGTCACt          <  4:8135/149‑1 (MQ=255)                                                                                                                                                     gTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACGTCACTGACGTCGa  <  3:231424/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACGTCACTGACGTCGA  >  NC_002947/3056055‑3056351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.