New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3056145 =	32 (0.650)	6 (0.130)	6/256	NT	16.2%	coding (217/741 nt)	PP_2668	ABC transporter ATP‑binding protein
	?	NC_002947	3056203 =	31 (0.650)					coding (159/741 nt)	PP_2668	ABC transporter ATP‑binding protein

GGCGGGCCAGTTCGGCCTCGACCCGCAGGTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAA  >  NC_002947/3055998‑3056293                                                                                                                                                    |                                                                                                                                                     ggCGGGCCAGTTCGGCCTCGACCCGCAGGTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCgg                                                                                                                                                      <  7:114878/148‑1 (MQ=255)  gCGGGCCAGTTCGGCCTCGACCCGCAGGTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGAc                                                                                                                                                    <  6:178753/149‑1 (MQ=255)   cGGGCCAGTTCGGCCTCGACCCGCAGGTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACg                                                                                                                                                   >  7:145958/1‑149 (MQ=255)     ggCCAGTTCGGCGTCGACGCGCAGGTGGCTCTGACGCCGCGACAGGCCATGGAGGGCGGCGTGGTAGGGGAGGTTGTGTTCAGCGCTCAGGTCGAGGGCGAGGGTGCTTTGCGGGAAGACCGCCCGCCGCTGGCGGACGGCCGGCCGTg                                                                                                                                                 >  8:66953/1‑149 (MQ=255)      gCCAGTTCGGCCTCGACCCGCAGGTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGc                                                                                                                                                <  2:169781/149‑1 (MQ=255)      gCCAGTTCGGCCTCGACCCGCAGGTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGc                                                                                                                                                <  7:66953/149‑1 (MQ=255)                      cccGCAGGTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGag                                                                                                                                >  8:182625/1‑149 (MQ=255)                             gTGGCTCTGACGCCGCGTCAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTGAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGagcagc                                                                                                                            <  7:70813/146‑1 (MQ=255)                             gTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGagcagc                                                                                                                            >  8:70813/1‑146 (MQ=255)                                  tctGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACAcg                                                                                                                    >  5:51540/1‑149 (MQ=255)                                          cgcgACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTc                                                                                                            >  3:132734/1‑149 (MQ=255)                                             ccggcaggtcggtttcagcctggcacccgggcgcttcgccgcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACCTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGcc                                                                                                         <  7:116950‑M1/46‑1 (MQ=255)                                              cggcaggtcggtttcagcctggcacccgggcgcttcgccgcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACCTGCAGCGT‑‑‑‑‑AGCGAGCAGCCGCACACGCGGATGTCGCCACGCTg                                                                                                   >  5:143454‑M1/103‑149 (MQ=255)                                                 ggCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGc                                                                                                     <  8:145958/149‑1 (MQ=255)                                                  gCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCt                                                                                                    >  8:140397/1‑149 (MQ=255)                                                     tcggtttcagcctggcacccgggcgcttcgccgcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACCTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCa                                                                                                 >  8:116950‑M1/96‑149 (MQ=255)                                                     aTGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTa                                                                                                                                     >  3:122442/1‑113 (MQ=255)                                                     aTGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTa                                                                                                                                     <  4:122442/113‑1 (MQ=255)                                                     aTGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAACCGCACACGCGGATGTCGCCACGCTGCa                                                                                                 <  4:149592/149‑1 (MQ=255)                                                       gCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAgg                                                                                               >  4:24630/1‑149 (MQ=255)                                                          aGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCg                                                                                            <  4:132734/149‑1 (MQ=255)                                                                 tggcacccgggcgcttcgccgcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgc                                                                                     >  2:286490‑M1/84‑149 (MQ=255)                                                                 gTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgc                                                                                     <  6:51540/149‑1 (MQ=255)                                                                    gTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgcgc                                                                                   <  3:24630/148‑1 (MQ=255)                                                                    gTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGcgcg                                                                                  >  4:135811/1‑149 (MQ=255)                                                                                cTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCg                                                                       <  7:140397/148‑1 (MQ=255)                                                                                     gcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTa                                                                                          <  4:25764‑M1/61‑1 (MQ=255)                                                                                     gcattgctgggccccaatggtgccggcaagtcgaccttgatcgccctgctcacgcgcctgtacGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTa                                                                                          >  3:25764‑M1/64‑124 (MQ=255)                                                                                           tCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCACGTcc                                                                                            <  4:62750/116‑2 (MQ=255)                                                                                           tCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCACGTcc                                                                                            >  3:62750/1‑115 (MQ=255)                                                                                                tccaggtccaggGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgc                                                                                     >  6:93690/1‑118 (MQ=255)                                                                                                tccaggtccaggGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGgc                                                                                     <  5:93690/118‑1 (MQ=255)                                                                                                     gtccaggGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCAc                                                 <  7:182625/149‑1 (MQ=255)                                                                                                                  ttcTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCa                                     <  8:53366/146‑1 (MQ=255)                                                                                                                           accacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCAc                                                 <  6:60607/127‑1 (MQ=255)                                                                                                                           accacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCAc                                                 >  5:60607/1‑127 (MQ=255)                                                                                                                            ccacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCAGACTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATgcggc                           >  1:95840/1‑148 (MQ=255)                                                                                                                            ccacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCGGCAATgcggc                           >  4:220346/1‑148 (MQ=255)                                                                                                                            ccacaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATgcggc                           >  8:147146/1‑148 (MQ=255)                                                                                                                              acaccCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGaa                        <  7:147146/149‑1 (MQ=255)                                                                                                                                              aGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAgg        <  3:135811/149‑1 (MQ=255)                                                                                                                                                    GACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGaaa  <  3:242184‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GGCGGGCCAGTTCGGCCTCGACCCGCAGGTGGCTCTGACGCCGCGACAGGCCATGCAAGGCGGCGTGGTAGCGCAGGTTCTGTTCAACGCTCAGGTCCAGGTCCAGGGTGCTTTGCTGAAACACCACACCCAGCTGGCGCAAGGCCGGACGTGCAGCGTTGCGTAGCGAGCAGCCGCACACGCGGATGTCGCCACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAA  >  NC_002947/3055998‑3056293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.