New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3150435	41 (0.840)	4 (0.090)	4/252	NT	10.7%	coding (539/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein
	?	NC_002947	= 3150489	27 (0.570)					coding (593/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein

CGGCATTGCTGTTCTACGCCGATGGCCGTGGCCTGGCGGATTCCGGGTTGCCGAATTACGCTCGCCTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3150285‑3150435 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaCGCCCCTCGCCCAGCACCTCGGCATGGCTGAGCCCGTGCTGCTGAAGTTGGCCATCGGCATC  <  NC_002947/3150489‑3150428                                                                                                                                                                                                                       CGGCATTGCTGTTCTACGCCGATGGCCGTGGCCTGGCGGATTCCGGGTTGCCGAATTACGCTCGCCTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCC                                                                  >  3:232615/1‑149   GCATTGCTGTTCTACGCCGATGGCCGTGGCCTGGCGGATTCCGGGTTGCCGAATTACGCTCGCCTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGA                                                                >  5:112680/1‑149            TTCTACGCCGATGGCCGTGGCCTGGCGGATTCCGGGTTGCCGAATTACGCTCGCCTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGACGCCCCTCG                                                       >  1:171621/1‑149                                                                 CCTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGACGCCCCTCGCCCAGCACCTCGGCATGGCTGAGCCCGTGCTGCTGAAGTTGGCCATCGGCATC  <  2:171621/149‑1                                                                                        CTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGACGCCCCTCGCCCAGCACCTCGGCATGGCTGAGCCCGTGCTGCTGAAGTTGGCCATCGGC     >  7:290639/1‑123                                                                                        CTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGACGCCCCTCGCCCAGCACCTCGGCATGGCTGAGCCCGTGCTGCTGAAGTTGGCCATCGGC     <  8:290639/123‑1                                                                                                                                                                                                                       CGGCATTGCTGTTCTACGCCGATGGCCGTGGCCTGGCGGATTCCGGGTTGCCGAATTACGCTCGCCTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3150285‑3150435 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaCGCCCCTCGCCCAGCACCTCGGCATGGCTGAGCCCGTGCTGCTGAAGTTGGCCATCGGCATC  <  NC_002947/3150489‑3150428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.