New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3150435	41 (0.840)	4 (0.090)	4/252	NT	10.7%	coding (539/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein
	?	NC_002947	= 3150489	27 (0.570)					coding (593/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein

CCTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTACCTGCTGGCGCCTTGGCTGCTGGCAGGCTTTCGGATGAATTTTCCGGAGAGCCTGGCGACCCGC  >  NC_002947/3150349‑3150637                                                                                                                                             |                                                                                                                                                        ccTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTgg                                                                                                                                                 <  3:276788/149‑1 (MQ=255)      ccGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGaa                                                                                                                                            <  6:112680/149‑1 (MQ=255)        gcgcAGCCGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACa                                                                                                                                          <  7:92642/149‑1 (MQ=255)            aGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGt                                                                                                                                                <  4:85731/139‑1 (MQ=255)            aGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGt                                                                                                                                                >  3:85731/1‑139 (MQ=255)            aGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTCGTCGACCAggcg                                                                                                                                      >  8:258196/1‑147 (MQ=255)                        cTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GAcg‑gc                                                                                                                        <  4:219861/148‑1 (MQ=255)                             ttGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGcc                                                                                                                    >  6:37542/1‑147 (MQ=255)                               ggCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAg                                                                                                                 <  1:42408/148‑1 (MQ=255)                                 cGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGaa                                                                                                              <  2:103033/149‑1 (MQ=255)                                       aGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGa                                                                                                                  <  6:265304/139‑1 (MQ=255)                                       aGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGa                                                                                                                  >  5:265304/1‑139 (MQ=255)                                        ggCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACg‑gcggc                                                                                                                     >  3:201177/1‑135 (MQ=255)                                        ggCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACg‑gcggc                                                                                                                     <  4:201177/135‑1 (MQ=255)                                              gagcgagcGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTccc                                                                                                 >  7:225237/1‑149 (MQ=255)                                                  gagcgCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGAT‑GCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAAc                                                                                            >  6:40813/1‑149 (MQ=255)                                                      gcCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTc                                                                                         <  5:274011/149‑1 (MQ=255)                                                        ccAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGc                                                                                       >  2:296868/1‑149 (MQ=255)                                                                  gCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGc                                                                             <  5:37542/149‑1 (MQ=255)                                                                    tttCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCTGGGAGGTACGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCgg                                                                              >  1:102622/1‑149 (MQ=255)                                                                         ccGGCTGGATGCCGATGGCCAACTTCAGCGGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGccc                                                                      >  7:49260/1‑149 (MQ=255)                                                                          cGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTc                                                                                                   >  6:120991/1‑119 (MQ=255)                                                                          cGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTc                                                                                                   <  5:120991/119‑1 (MQ=255)                                                                              tGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTAc                                                                 <  3:95041/149‑1 (MQ=255)                                                                                gATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGtcggcatccagccggtgaaagctgaacgctgggcgctcgctctgcgccttcaccgccaaggcaggatcgggcagctgcgcggccagg                                                                  <  2:171621‑M2/149‑88 (MQ=255)                                                                                  tGCCGATGGCCAACTTCAGAAGCACGGGCTCAGCCATGCCGAGGAGCTGGGCGAGGCGCCTCGGCAGGTCTAACACGAGCGCCT‑‑GACG‑GCCGCCGAGGAAGCCTAGGCCTCCCGCAACTTCGCAACCAGCGGCCAGCACCGCTACctg                                                              >  8:231326/1‑148 (MQ=255)                                                                                   gCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGtcggcatccagccggtgaaagctgaacgctgggcgctcgctctgcgccttcaccgccaaggcag                                                                                         <  8:290639‑M2/123‑65 (MQ=255)                                                                                   gCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGtcggcatccagccggtgaaagctgaacgctgggcgctcgctctgcgccttcaccgccaaggcag                                                                                         >  7:290639‑M2/1‑59 (MQ=255)                                                                                      gATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTACCTGCTGgc                                                         <  4:90866/149‑1 (MQ=255)                                                                                                       gcaCGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTACCTGCTGGCGCCTTGGCTGCTGGCAg                                        <  7:231326/149‑1 (MQ=255)                                                                                                              cTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTACCTGCTGGCGCCTTGGCTGCTGGCAGGCTTTCg                                 <  6:170252/149‑1 (MQ=255)                                                                                                                        ccGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTACCTGCTGGCGCCTTGGCTGCTGGCAGGCTTTCGGATGAAttt                        >  2:247730/1‑148 (MQ=255)                                                                                                                                     cGAGGGGCGtcggcatccagccggtgaaagctgaacgctgggcgctcgctctgcgccttcaccgccaaggcaggatcgggcagctgcgcggccaggcgagcgtaattcggcaacccggaatccgccaggccacggccatcggcgtagaa             >  1:171621‑M2/1‑9 (MQ=255)                                                                                                                                      gAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGTGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTACCTGCTGGCGCCTTGGCTGCTGGCAGGCTTTCGGATGAATTTTCCGGAGAGCCTGGc         <  7:258196/149‑1 (MQ=255)                                                                                                                                           gCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCACGCCCGCTACCTGCTGGCGCCTTGGCTGCTGGCAGGCTTTCGGAGGAATTTTCCGGAGAGCCTGGCGGccc    >  8:196951/1‑149 (MQ=255)                                                                                                                                             gTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTACCTGCTGGCGCCTTGGCTGCTGGCAGGCTTTCGGATGAATTTTCCGGAGAGCCTGGCGACCcgc  <  8:49260/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                        CCTGGCCGCGCAGCTGCCCGATCCTGCCTTGGCGGTGAAGGCGCAGAGCGAGCGCCCAGCGTTCAGCTTTCACCGGCTGGATGCCGATGGCCAACTTCAGCAGCACGGGCTCAGCCATGCCGAGGTGCTGGGCGAGGGGCGTCGGCTGGTCGAACAGGAGCGCCT‑‑GACG‑GCGGCCGAGGAAGCCTTGGCCTCCCGCAACTTCGCCACCAGCGGCCAGGCCCGCTACCTGCTGGCGCCTTGGCTGCTGGCAGGCTTTCGGATGAATTTTCCGGAGAGCCTGGCGACCCGC  >  NC_002947/3150349‑3150637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.