New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3174337	51 (1.040)	3 (0.060)	3/250	NT	5.7%	coding (508/837 nt)	PP_2786	hypothetical protein
	?	NC_002947	= 3174361	50 (1.070)					coding (532/837 nt)	PP_2786	hypothetical protein

TAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3174222‑3174337 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccggTCTTGGCCAGCACGGCAGGCGTCGCCGGCTCACGCTCGATCACGTAGCAATCGCGGCCCTGCAACTGCTCTTCGCCAACCAGCGTTTGGCGATAGTCTTCGGCGCGAATCTTGTCGAGGTCGGCATAGGAGTAGTCGCTACCCA  <  NC_002947/3174361‑3174218                                                                                                                                                                                                                                                                      TAGCGCCTACTCCTCTGCCGACCTCGACACGATTCGCGCCGAAGACTATCGCCACCCGCTGGTGGGCGAAGCGCAGTTGCAGGGCCGCGATTGCTACGTGATCGCGCGTGAGCCGGTCTTGGCCAGCACGGCAGGCGTCGCCGGCTCAC                                                                                                                 <  7:209981/149‑1                                                                    GAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGTCTTGGCCAGCACGGCAGGCGTCGCCGGCTCACGCT                                                                                                              >  5:214883/1‑85                                                                    GAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGTCTTGGCCAGCACGGCAGGCGTCGCCGGCTCACGCT                                                                                                              <  6:214883/85‑1                                                                                                                GCCGGTCTTGGCCAGCACGGCAGGCGTCGCCGGCTCACGCTCGATCACGTAGCAATCGCGGCCCTGCAACTGCTCTTCGCCAACCAGCGTTTGGCGATAGTCTTCGGCGCGAATCTTGTCGAGGTCGGCATAGGAGTAGTCGCTACCCA  <  6:29642/149‑1                                                                                                                                                                                                                                                                      TAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3174222‑3174337 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccggTCTTGGCCAGCACGGCAGGCGTCGCCGGCTCACGCTCGATCACGTAGCAATCGCGGCCCTGCAACTGCTCTTCGCCAACCAGCGTTTGGCGATAGTCTTCGGCGCGAATCTTGTCGAGGTCGGCATAGGAGTAGTCGCTACCCA  <  NC_002947/3174361‑3174218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.