New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3174337 | 51 (1.040) | 3 (0.060) | 3/250 | NT | 5.7% | coding (508/837 nt) | PP_2786 | hypothetical protein |
? | NC_002947 | = 3174361 | 50 (1.070) | coding (532/837 nt) | PP_2786 | hypothetical protein |
TCCACCACCGACAAACGCGGGGCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAGCAGATGCGCACCCTGAAGACTGAAACCATCG > NC_002947/3174190‑3174484 | tCCACCACCGACAAACGCGGGGCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGc > 7:208473/1‑149 (MQ=255) ccacaaCCGACAAACGCGGGGCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGc > 1:276854/1‑148 (MQ=255) caccacCGACAAACGCGGGGCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGa > 7:124306/1‑149 (MQ=255) aaaCGCGGGGCGTTCATGGGTAGCGACTACTCCTCTGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGt < 8:274993/149‑1 (MQ=255) aCGCGGGGCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGAATGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGc > 7:127084/1‑149 (MQ=255) gcgGGGCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTg < 3:243014/149‑1 (MQ=255) cgGGGCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTgg < 3:283648/149‑1 (MQ=255) ggggCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGc < 1:154583/149‑1 (MQ=255) gggCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGc > 8:199898/1‑148 (MQ=255) tGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGAccggc < 6:29642‑M2/149‑6 (MQ=255) tAGCGCCTACTCCTCTGCCGACCTCGACACGATTCGCGCCGAAGACTATCGCCACCCGCTGGTGGGCGAAGCGCAGTTGCAGGGCCGCGATTGCTACGTGATCGCGCGTGAGCCGGtcttggccagcacggcaggcgtcgccggctcac < 7:209981‑M1/149‑34 (MQ=255) actactCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAg < 2:231482/149‑1 (MQ=255) actactCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAg < 6:272580/149‑1 (MQ=255) ctgcTATGCAGACCTCGACAAGATTCGCGCCGAAGTCTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTc < 8:124306/145‑1 (MQ=255) cTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAgg > 1:45181/1‑149 (MQ=255) ccGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGAAAAAAGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTgg > 1:256364/1‑149 (MQ=255) cGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAACCGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTggg < 2:224355/149‑1 (MQ=255) cGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGcc > 2:194642/1‑109 (MQ=255) cGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGcc < 1:194642/109‑1 (MQ=255) gACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGt > 4:18668/1‑149 (MQ=255) cTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGa < 3:247835/149‑1 (MQ=255) aaGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACaag > 3:139707/1‑147 (MQ=255) aGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACaagaag < 8:208473/149‑1 (MQ=255) gcCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACt > 2:6191/1‑149 (MQ=255) gcCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGAGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACt > 5:79632/1‑149 (MQ=255) ccGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTg < 4:139707/149‑1 (MQ=255) cGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTgg > 6:228154/1‑149 (MQ=255) cGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTgg < 5:228154/149‑1 (MQ=255) tCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACt > 5:98417/1‑134 (MQ=255) tCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACt < 6:98417/134‑1 (MQ=255) aaaCGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGAc < 5:29642/149‑1 (MQ=255) gCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAAc < 4:166399/124‑1 (MQ=255) gCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAAc > 3:166399/1‑124 (MQ=255) gCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAAc > 5:143468/1‑124 (MQ=255) gCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAAc < 6:143468/124‑1 (MQ=255) cTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGActtctt < 6:79632/149‑1 (MQ=255) gTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGa < 1:6191/149‑1 (MQ=255) ttGGCGAAGAGCAGTTGCAGGGCCGCGAATGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGAt < 8:127084/149‑1 (MQ=255) gAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGtcttggccagcacggcaggcgtcgccggctcacgct > 5:214883‑M1/1‑49 (MQ=255) gAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGtcttggccagcacggcaggcgtcgccggctcacgct < 6:214883‑M1/85‑37 (MQ=255) gAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTaa > 4:73744/1‑148 (MQ=255) aaGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTaa > 4:86852/1‑147 (MQ=255) agagCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGAt > 4:285672/1‑142 (MQ=255) agagCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGAt < 3:285672/142‑1 (MQ=255) cAGTTGCAGGGCCGCGTTTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGTGTTGTCATGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGTTGTAAATGgtgt < 2:276854/149‑1 (MQ=255) aGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGgtgt > 2:193855/1‑148 (MQ=255) gggCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACACCAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCa < 7:199898/149‑1 (MQ=255) ggCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCaa < 2:256364/149‑1 (MQ=255) gCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTggg > 4:150519/1‑84 (MQ=255) gCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTggg < 3:150519/84‑1 (MQ=255) ccGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAg > 6:233281/1‑148 (MQ=255) aTTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAGCAGATg < 3:86852/149‑1 (MQ=255) ttGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGgt > 1:42329/1‑130 (MQ=255) ttGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGgt < 2:42329/130‑1 (MQ=255) cTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAGCAGATgcgc < 5:233281/148‑1 (MQ=255) cGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAGCAGATGCGCAccc > 6:155154/1‑149 (MQ=255) tCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAGCAGATGCGCACCCTg > 1:237229/1‑146 (MQ=255) tCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAGCAGATGCGCACCCTGAAg < 1:193855/149‑1 (MQ=255) aGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGAccggctcacgctcgatcacgtagcaatcgcggccctgcaactgctcttc < 6:214883‑M2/85‑50 (MQ=255) aGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGAccggctcacgctcgatcacgtagcaatcgcggccctgcaactgctcttc > 5:214883‑M2/1‑36 (MQ=255) gTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGAccggctcacgcgcgatcacgtagcaatcgcggccctgcaactgcgcttcgcccaccagcgggtggcgatagtcttcggcgcgaatcgtgtcgaggtcggcagaggagtaggcgcta < 7:209981‑M2/149‑117 (MQ=255) gCCGGtcttggccagcacggcaggcgtcgccggctcacgctcgatcacgtagcaatcgcggccctgcaactgctcttcgccaaccagcgtttggcgatagtcttcggcgcgaatcttgtcgaggtcggcataggagtagtcgctaccca < 6:29642‑M1/149‑145 (MQ=255) ggCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAGCAGATGCGCACCCTGAAGACTGAAACCATCg < 2:45181/149‑1 (MQ=255) | TCCACCACCGACAAACGCGGGGCGTTCATGGGTAGCGACTACTCCTATGCCGACCTCGACAAGATTCGCGCCGAAGACTATCGCCAAACGCTGGTTGGCGAAGAGCAGTTGCAGGGCCGCGATTGCTACGTGATCGAGCGTGAGCCGGCGACGCCTGCCGTGCTGGCCAAGACCGGCTACAACAAGCTCAAGGTCTGGGTTGACAAGAAGAACTCACTGGTGCTGCGCCAGGACTTCTTCGATGTAAAAGGTGTGATGTTCAAGCAGATGCGCACCCTGAAGACTGAAACCATCG > NC_002947/3174190‑3174484 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |