New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3238237	29 (0.590)	3 (0.060)	3/250	NT	8.9%	coding (676/1218 nt)	PP_2836	2‑keto‑3‑deoxyxylonate dehydratase
	?	NC_002947	= 3238258	34 (0.730)					coding (697/1218 nt)	PP_2836	2‑keto‑3‑deoxyxylonate dehydratase

TCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCA‑TCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3238084‑3238237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcaTGGCGCCCTTGATGCTGCCATTGCTCGACACGGCCAGCACCACTTCCGGCTCTGGGTTGTTCCAGCTGGACTTGGGGTGGATGCCGATGTCGGCGCCGTGGCCAACCGCGGACAGCGGTTGGGCCTTGGTGAACACTTCGGCATCCGG  <  NC_002947/3238258‑3238111                                                                                                                                                                                                                                                                                                                 TCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGTCACGGCGCCGACATCGGCA‑TCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTC                                                                                                                                                           <  1:266259/149‑1   GCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCACTCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTC                                                                                                                                                           <  1:238211/148‑1    CAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCA‑TCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAG                                                                                                                                                        <  6:99064/149‑1     AGTACCTGGAGGTGGTTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTACGCGGTTGGCCACGGCGCCGACATCGGCA‑TCCAACCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGC                                                                                                                                                       <  7:124774/149‑1                                      AAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCA‑TCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCATGGCGCCCTTGATGCTGACATTGCTCGACACG                                                                                                                      <  7:30194/149‑1                                             CACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCA‑TCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCATGGCGCCCTTGATGCTGCCATTGCTCGAC                                                                                                                         >  7:19221/1‑139                                             CACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCA‑TCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCATGGCGCCCTTGATGCTGCCATTGCTCGAC                                                                                                                         <  8:19221/139‑1                                                                                                                                                          CATGGCGCCCTTGATGCTGCCATTGCTCGACACGGCCAGCACCACTTCCGGCTCTGGGTTGTTCCAGCTGGACTTGGGGTGGATGCCGATGTCGGCGCCGTGGCCAACCGCGGACAGCGGTTGGGCCTTG                      <  1:145686/130‑1                                                                                                                                                          CATGGCGCCCTTGATGCTGCCATTGCTCGACACGGCCAGCACCACTTCCGGCTCTGGGTTGTTCCAGCTGGACTTGGGGTGGATGCCGATGTCGGCGCCGTGGCCAACCGCGGACAGCGGTTGGGCCTTG                      >  2:145686/1‑130                                                                                                                                                           ATGGCGCCCTTGCTGCTGCCATTGCTCGACACGGCCAGCACCACTTCCGGCTCTGGGTTGTTCCAGCTGGACTTGGGGTGGATGCCGATGTCGGCGCCGGGGCCAACCGCGGACAGCGGTTGGGCCTTGGTGAACGCTTCGGCATCCGG  <  3:219933/149‑1                                                                                                                                                                                                                                                                                                                 TCGCAGTACCTGGAGGTGGGTATCGGCCCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCA‑TCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3238084‑3238237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcaTGGCGCCCTTGATGCTGCCATTGCTCGACACGGCCAGCACCACTTCCGGCTCTGGGTTGTTCCAGCTGGACTTGGGGTGGATGCCGATGTCGGCGCCGTGGCCAACCGCGGACAGCGGTTGGGCCTTGGTGAACACTTCGGCATCCGG  <  NC_002947/3238258‑3238111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.