New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3238237	29 (0.590)	3 (0.060)	3/250	NT	8.9%	coding (676/1218 nt)	PP_2836	2‑keto‑3‑deoxyxylonate dehydratase
	?	NC_002947	= 3238258	34 (0.730)					coding (697/1218 nt)	PP_2836	2‑keto‑3‑deoxyxylonate dehydratase

CCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGAT  >  NC_002947/3238111‑3238395                                                                                                                                                    |                                                                                                                                          ccGGATGCCGAAGCGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCCCGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCAGCAAGGGCGCCAt                                                                                                                                          <  3:219933‑M2/149‑2 (MQ=255)               gtTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAacgacg                                                                                                                            >  7:114145/1‑149 (MQ=255)                     cAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCAtg                                                                                                                                         <  1:145686‑M2/130‑3 (MQ=255)                     cAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCAtg                                                                                                                                         >  2:145686‑M2/1‑128 (MQ=255)                             aaCCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGAc                                                                                                              <  4:165905/149‑1 (MQ=255)                              aCCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACt                                                                                                             <  4:149975/149‑1 (MQ=255)                                     tCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCCACCTGCGCGACTTCGAAgg                                                                                                      >  1:277077/1‑149 (MQ=255)                                                ccACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGt                                                                                           >  4:129126/1‑149 (MQ=255)                                                 cACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGtt                                                                                          >  8:233239/1‑149 (MQ=255)                                                 cACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGtt                                                                                          >  3:264385/1‑149 (MQ=255)                                                     gcgcCGACATCGGCATCCACCACAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCTTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGt                                                                                               <  7:173197/140‑1 (MQ=255)                                                     gcgcCGACAACGGCATCCACCCCAAGTCCAGCTGGAACAACACAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAAAGGCAGCATCAAGCGCGCCAAGCTCCGCAACGACGTCAACCTGCGCCACAACGAAGGGCGTact                                                                                               >  8:173197/1‑138 (MQ=255)                                                      cgcCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTtgctgc                                                                                     <  8:114145/149‑1 (MQ=255)                                                             aTCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTcc                                                                                >  5:38065/1‑147 (MQ=255)                                                                   aTCCACCCCAAGTCCAGCTGGAACAACCCAGCGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTccaaggccaa                                                                        <  2:277077/149‑1 (MQ=255)                                                                    tCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTccaaggccaag                                                                       <  8:250879/149‑1 (MQ=255)                                                                       aCCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGa                                                                     >  1:12569/1‑148 (MQ=255)                                                                          ccAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCACCCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGacaac                                                                 <  7:142291/149‑1 (MQ=255)                                                                          ccAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGacaa                                                                  >  7:192978/1‑148 (MQ=255)                                                                               tCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGc                                                            <  7:233239/149‑1 (MQ=255)                                                                                   gCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGt                                                                                  >  8:268271/1‑123 (MQ=255)                                                                                   gCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGt                                                                                  <  7:268271/123‑1 (MQ=255)                                                                                             cccTGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTgg                                              >  5:283508/1‑149 (MQ=255)                                                                                                     cGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCgctg                                      <  2:12569/149‑1 (MQ=255)                                                                                                          gtggtgCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCg                                 <  6:38065/149‑1 (MQ=255)                                                                                                            ggtgCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGgt                               >  7:274550/1‑149 (MQ=255)                                                                                                               gCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGgttgt                            <  8:274550/149‑1 (MQ=255)                                                                                                                cTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGgttgt                            <  8:192978/148‑1 (MQ=255)                                                                                                                   gCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTcg                         <  3:129126/148‑1 (MQ=255)                                                                                                                     cGTGTCGAGCAATGTCAGCATCAAGGGCGCCAtgctcgacacggccagcaccacttccggctctgggttgttccagctggacttggggtggatgccgatgtcggcgccgtggccaaccgcggacagcggttgggccttggtgaacactt                      <  7:30194‑M2/149‑118 (MQ=255)                                                                                                                        gtCGAGCAATGGCAGCATCAAGGGCGCCAtgctcgacacggccagcaccacttccggctctgggttgttccagctggacttggggtggatgccgatgtcggcgccgtggccaaccgcggacagcggttgggccttggtg                             >  7:19221‑M2/1‑29 (MQ=255)                                                                                                                        gtCGAGCAATGGCAGCATCAAGGGCGCCAtgctcgacacggccagcaccacttccggctctgggttgttccagctggacttggggtggatgccgatgtcggcgccgtggccaaccgcggacagcggttgggccttggtg                             <  8:19221‑M2/139‑111 (MQ=255)                                                                                                                              cAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCg             <  6:283508/149‑1 (MQ=255)                                                                                                                              cAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCg             >  6:133664/1‑149 (MQ=255)                                                                                                                                    cagcaTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTc                          <  2:151123/130‑1 (MQ=255)                                                                                                                                    cagcaTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTc                          >  1:151123/1‑130 (MQ=255)                                                                                                                                     agcaTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTc                          >  6:84981/1‑129 (MQ=255)                                                                                                                                     agcaTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTc                          <  5:84981/129‑1 (MQ=255)                                                                                                                                         tCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGAt  >  3:100873/1‑149 (MQ=255)                                                                                                                                          cAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCgg                                >  2:87121/1‑118 (MQ=255)                                                                                                                                                    |                                                                                                                                          CCGGATGCCGAAGTGTTCACCAAGGCCCAACCGCTGTCCGCGGTTGGCCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGAT  >  NC_002947/3238111‑3238395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.