New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3271443	43 (0.880)	5 (0.100)	5/260	NT	9.8%	coding (642/1953 nt)	PP_2869	FMN‑binding oxidoreductase
	?	NC_002947	= 3271466	49 (1.010)					coding (619/1953 nt)	PP_2869	FMN‑binding oxidoreductase

CCAGCGAGGCCGAGGTACCGGCGACGATATGCAGGTAGTCGAGCTGGCCCTGCAAGGCCATGGCAGCAGCCAGTGACTCGTCCTCACTCAGGCCCTGGCTGTCGCGCTCGTCAGCGCTGATGCGCAGGCCAATGATGAATTGCTCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3271295‑3271443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTGGCCGCAGTGCGCGCGGCCACCGATGAGCAATTCATCATTGGCCTGCGCATCA  <  NC_002947/3271466‑3271412                                                                                                                                                                                                              CCAGCGAGGCCGAGGTACCGGCGACGATATGCAGGTAGTCGAGCTGGCCCTGCAAGGCCATGGCAGCAGCCAGTGACTCGTCCTCACTCAGGCCCTGGCTGTCGCGCTCGGCAGCGCTCATGCGCAGGCCAATGAAGCATTGCTCAACG                                                         >  7:269799/1‑149                          GATATGCAGGTAGTCGAGCTGGCCCTGCAAGGCCATGGCAGCAGCCAGTGACTCGTCCTCACTCAGGCCCTGGCTGTCGCGCTCGTCAGCGCTGATGCGCAGGCCAATGATGAATTGCTCATCGGTGGCCGCAGTGCGCGCGGCCAC                                  <  7:252107/147‑1                          GATATGCAGGTAGTCGAGCTGGCCCTGCAAGGCCATGGCAGCAGCCAGTGACTCGTCCTCACTCAGGCCCTGGCTGTCGCGCTCGTCAGCGCTGATGCGCAGGCCAATGATGAATTGCTCATCGGTGGCCGCAGTGCGCGCGGCCAC                                  >  8:252107/1‑147                                                         tcacTGGCTGCCGCCAGTGACTCGGCCCAACGCAGGCCCTGCGTGTCGCGCGCGGCCGCGCTGATGCGCAGGCCAATGATGAATTGCTCCTCGCTGGCCGCAGTGCGCGCGGCCACCGATGAGCAATTCATCTTTGGCCTGCGCATCA  <  8:269799/144‑1                                                                                        TCAGGCCCTGGCTGTCGCGCTCGTCAGCGCTGATGCGCAGGCCAATGATGAATTGCTCATCGCTGGCCGCAGTGCGCGCGGCCACCGA                               <  1:227943/88‑1                                                                                        TCAGGCCCTGGCTGTCGCGCTCGTCAGCGCTGATGCGCAGGCCAATGATGAATTGCTCATCGCTGGCCGCAGTGCGCGCGGCCACCGA                               >  2:227943/1‑88                                                                                                                                                                                                              CCAGCGAGGCCGAGGTACCGGCGACGATATGCAGGTAGTCGAGCTGGCCCTGCAAGGCCATGGCAGCAGCCAGTGACTCGTCCTCACTCAGGCCCTGGCTGTCGCGCTCGTCAGCGCTGATGCGCAGGCCAATGATGAATTGCTCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3271295‑3271443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTGGCCGCAGTGCGCGCGGCCACCGATGAGCAATTCATCATTGGCCTGCGCATCA  <  NC_002947/3271466‑3271412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.